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SCNpilot_expt_1000_bf_scaffold_21390_curated_1

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 2..463

Top 3 Functional Annotations

Value Algorithm Source
Tn3 family transposase for insertion sequence element id=2820196 bin=GWF1_Rhodobacteraceae_65_7 species=Sphingobium japonicum genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 312
  • Evalue 3.00e-82
Transposase {ECO:0000313|EMBL:EXS69192.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 153.0
  • Bit_score: 312
  • Evalue 4.30e-82
Tn3 family transposase for insertion sequence element similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 153.0
  • Bit_score: 310
  • Evalue 2.80e-82

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Taxonomy

Sphingobium sp. Ant17 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
AAACGCCAGAACAGGCTGGATTTTGCATTGGCTGAACTGGGCCGTATCGAGCGCACTTTGTTCACGCTCGATTGGCTCGAACAACCGGAACTGCGCCGTGCCTGTCAGGCCGGTCTCAACAAAGGCGAAGCGCGGCACACGCTTGCCGCCGCCATCTATACCAACCGGCAGGGCCGGTTCACCGATCGCTCGCTGGAAAATCAGGAATTTCGTGCATCTGGGCTGAACTTGCTGATCGCGGCGATTTCCTACTGGAACACGGTCTATCTCGACCGCGCCGCCAAGCACCTCAACGCCGTCGGCACAACGTTCGATGCGGCACTGCTCGCGCACCTGTCTCCGATGGGCTGGGCGCATATCAGCCTGACCGGCGATTACCTCTGGGAACAGGCAAGGCGACTTCCCGCAGGTGAATTCCACCCACTCAACGAGCCAATGGCGCGGTTGAAGCGTGTTGCGTAG
PROTEIN sequence
Length: 154
KRQNRLDFALAELGRIERTLFTLDWLEQPELRRACQAGLNKGEARHTLAAAIYTNRQGRFTDRSLENQEFRASGLNLLIAAISYWNTVYLDRAAKHLNAVGTTFDAALLAHLSPMGWAHISLTGDYLWEQARRLPAGEFHPLNEPMARLKRVA*