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SCNpilot_expt_1000_bf_scaffold_941_curated_25

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 20340..20690

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirB3 family protein n=3 Tax=Sphingobium RepID=F6F481_SPHCR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 116.0
  • Bit_score: 237
  • Evalue 9.40e-60
virB3; type IV secretory pathway VirB3 component; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 116.0
  • Bit_score: 237
  • Evalue 3.00e-60
Type IV secretory pathway VirB3 component {ECO:0000313|EMBL:EIM68960.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 116.0
  • Bit_score: 237
  • Evalue 1.30e-59

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Taxonomy

Sphingobium indicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
GTGAAGGAGAGCGCCGCCCTGGACGAGCGGCTGCGCGAGGAGACGCTGTTCCTGGCGGTCACGCGGCCGACGATGTGGCTCGGCGTGCCGCTCGAAGCCTCGTTGCCGATCGCGCTTGCCGCCTGTCTCACTTTGATCGTCAGCGGCAACCCGCTCTATGCCGGCGCCATCGGAGGCGCCTGTCTTGCCGTGGCGCGGCTCATCGTGCGGCACGATGCCAATGCCTTCCGGCTGCTGTGGCTGTGGACCATGACCAAGGCGCGCAGCCGGAACCGCGCCTGGTGGGGCGGCAGTTCCTATTCGCCGCTCCCGGTTGCCGGGCTGAAACGCAAGGGCTTTGCGCGTGGCTAG
PROTEIN sequence
Length: 117
VKESAALDERLREETLFLAVTRPTMWLGVPLEASLPIALAACLTLIVSGNPLYAGAIGGACLAVARLIVRHDANAFRLLWLWTMTKARSRNRAWWGGSSYSPLPVAGLKRKGFARG*