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SCNpilot_expt_1000_bf_scaffold_622_curated_1

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(45..1928)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KFN4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 33.9
  • Coverage: 590.0
  • Bit_score: 269
  • Evalue 1.20e-68
Uncharacterized protein {ECO:0000313|EMBL:EQB32193.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.9
  • Coverage: 590.0
  • Bit_score: 269
  • Evalue 1.70e-68
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 620.0
  • Bit_score: 264
  • Evalue 7.10e-68

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Taxonomy

Sphingobium ummariense → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1884
ATGAGTAGGTTGGGCTTGTCCGGTGCGGCGTTCATTGGAACCGCACTGGCAAATATGTTGGCGATCAGTCCTGTACTCGCACAGGAATCGGATGTGAGCGAGCGGGGGGAAAGGGAGACTCTCGGTCTCGAAGACATCGTCGTAACCGCGACGCGGCGGTCGGATACGGTCAATCGCGTGCCGCTCAGCATCACGGCGGTGACGCAGGAGGGGCTCGATCGCCAGGGTCTGCAATCCCCATCGGATCTGCAACGCACCGTGCCCGCGTTGACGGTATCAGGGCAGGCTGGCGGCGTTCAGAACTTCTCAATTCGCGGCATTGTCGCCACGAGTGGCGCAGCGACCACCGGCCTTTATCTCGATGATACGCCGCTTCAGCGGCGCAACTCGGCCGGCGTGCAGCAGAACAACGGTACTCCCGCGCCGACACTGTTCGACCTGGACCGTATCGAGGTTCTGCGTGGGCCGCAGGGCACGCTCTATGGCGGCAGCTCGCAGGGCGGCACGATCCGGTTCATTACGCCGACACCCAGCCTCACCGAATTCTCCGGACGCGCGATGGTTCAGGCATCCACGGTGATGGATGGAGGCATCGGTTATGAGGGCGGTGTTGCGCTTGGCGGTCCGCTGGTCGAAGACAGGCTGGGCGTTCGTATCAGCGCCTTCCACCGCAACGTGGCGGGCTTTATCGACATGGTGGATCCATATAATAATGGCGCCCTGCTCAATAAGAACGCCAATGGGCGCACAGAAACGTCAGCGCGGGGTTCGCTGTTGTTCGCACCGTCTCAGGATACGAGCATAACAGCCTCCTATTTCTTCTCATATCAGTATGATGAAGGTGGTCCGCGCGGCTATAACCTGCCGGTCAACGAGAAATATGCGACGGCGGAATATTGTTTCGACACGCGGCGTACGGCATCCTCCGTGCCATCCGCCATCACTCCGGTGGCTTGTCCGGCCCGGGATGAACAACCTGATTACATATACCGCCGTGAGCGAGTCGAATATGGACCGTTCCCGTATCTTGGCAAGTATAAGTCGATTGATCGCCGCAAGAACGAAGTTGGAACGACGCTACATGTGGGGTCGTTGACGGTCGATCATTCGTTCGACACCTTCTCCGTCAAGTCTATTACGTCCTTCATTAGCGACAAGACCGTTGGCGACGGCACGGAAATGAATCAGCTGACTGCCCAGCAGCGCCTGGAGAACGTTCCTGCTGACCAGACCAACCGCAATCTCTGGGCCAGTACAGGCTTCCCGCTGTTTTCGCCTTGGCCTGATTATTACGTTCTGGTCGACGATGGGTACAACAAGCGCCACGGTTTCATGCAGGAACTGCGGCTCGCCTCGACAAATGACGGGCCGTTTAGCTGGGTTGTTGGTGCCTATGCCTCGAAGATCAAGGCATCCAGCGAATATTTCTACATCGGTGATATCGAGCGGCAGGTTGCCTTATTGTTTGGTATGAAACCGGAACAGCGTTATACTGGTTTCGATGAGAACGGGAACAGGGTTGGTATTCCCGCTCTGCCCAACGGCATCGTCACGACGCGCCTGCAACATCTGACCGACAAGGAAATCGCGGGCTTTGGTGAGCTTAATTACCTGCTTTTCGACAAGCTGAAGTTCACCGTCGGCGCCCGTATCTCGCAGGTCTCCTTCGATTATGACCAGAAGTTCTATGGCCCGGCGAGCGGATGGAACGTCCCCACGGTCCAGAACGGCGGTATCGTTGGCGGATCGGTCAAGGAGTCGCCGATCACGCCCAAATTCGGTGTGCAATATCAGATGACCCCCGGGAGCATGATCTACGCGTCAGCGAGCAAGGGTTTCCGCGCGGGTGGTGTTAACCCGCCTTATTCACCAAAAGTGTCCTGA
PROTEIN sequence
Length: 628
MSRLGLSGAAFIGTALANMLAISPVLAQESDVSERGERETLGLEDIVVTATRRSDTVNRVPLSITAVTQEGLDRQGLQSPSDLQRTVPALTVSGQAGGVQNFSIRGIVATSGAATTGLYLDDTPLQRRNSAGVQQNNGTPAPTLFDLDRIEVLRGPQGTLYGGSSQGGTIRFITPTPSLTEFSGRAMVQASTVMDGGIGYEGGVALGGPLVEDRLGVRISAFHRNVAGFIDMVDPYNNGALLNKNANGRTETSARGSLLFAPSQDTSITASYFFSYQYDEGGPRGYNLPVNEKYATAEYCFDTRRTASSVPSAITPVACPARDEQPDYIYRRERVEYGPFPYLGKYKSIDRRKNEVGTTLHVGSLTVDHSFDTFSVKSITSFISDKTVGDGTEMNQLTAQQRLENVPADQTNRNLWASTGFPLFSPWPDYYVLVDDGYNKRHGFMQELRLASTNDGPFSWVVGAYASKIKASSEYFYIGDIERQVALLFGMKPEQRYTGFDENGNRVGIPALPNGIVTTRLQHLTDKEIAGFGELNYLLFDKLKFTVGARISQVSFDYDQKFYGPASGWNVPTVQNGGIVGGSVKESPITPKFGVQYQMTPGSMIYASASKGFRAGGVNPPYSPKVS*