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SCNpilot_expt_1000_bf_scaffold_622_curated_5

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 8024..8902

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 290.0
  • Bit_score: 311
  • Evalue 1.40e-81
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 282.0
  • Bit_score: 306
  • Evalue 1.00e-80
Shikimate dehydrogenase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XT86_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 287.0
  • Bit_score: 307
  • Evalue 1.90e-80

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Taxonomy

Acidocella aminolytica → Acidocella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGTCGAGCACTGGCATCAAGGATGAAATCGCGGGCGGCAGGGGTATATTGACGGGCCTGATCGGTGCGGGGATCCAGGGCTCACGCTCTCCGGCCATGCATATGCGAGAGGCCGATGCGCAGGGCCTGCGCCTGATCTACCGCCTCTACGATCTTCAGGTGGATGGGCGCAGCCTCGACGATCTTCCGCGCCTGCTGGACGCGCTCGAAACCGCGGGCTTTGCCGGCGTGAACGTCACGCACCCGGTCAAGCAGCGCGTGATTCCGCTGCTCGATGAATTGAGTGCGGAAGCCCGGCAGGTCGGCGCGGTCAACACCATCCTGTTCGCCGGGGGTCGCCGGGTCGGCCACAATACGGACTGGTCCGGCTTCGCGGAAAGTTTCACCCGAACGCTGGGCGACGCACGCATCGCCAAGGTGGTGCAGGTCGGCGCGGGCGGCGCCGGCGCCGCTACCGCCGTGGCCATGCTGCGGCTGGGCTGCACCGATCTGCTCATTCACGATAGCAGCACCGAGCGCGCGACCGATCTGGTCGAGCGCCTCTCGCACGATTTCCCCGACGCGCGCCTGACGGCCCAGACCGGATCGCCGGAAGCGGACATGACCGACGCGGACGGGCTGGTGAACGCCACGCCCATCGGCATGGAAGGACATCCCGGCATGCCAATCCCCGCGACATGGCTTCGTGCCGATATGTGGGTGGCCGACGTCATCTATTTCCCGCTCGAAACGGCCTTGTTGCTGGCCGCCAAGGCGCGCGGCTGCGCAACGCTCAACGGTGGCGGCATGGCCGTTTTTCAGGCTGCGCGGGCATTTGACCTGTTCACCGGGAAAATTGCCGACCGCGAGCGCATGGTGCGCGATTTCGGAACGATCTAA
PROTEIN sequence
Length: 293
MSSTGIKDEIAGGRGILTGLIGAGIQGSRSPAMHMREADAQGLRLIYRLYDLQVDGRSLDDLPRLLDALETAGFAGVNVTHPVKQRVIPLLDELSAEARQVGAVNTILFAGGRRVGHNTDWSGFAESFTRTLGDARIAKVVQVGAGGAGAATAVAMLRLGCTDLLIHDSSTERATDLVERLSHDFPDARLTAQTGSPEADMTDADGLVNATPIGMEGHPGMPIPATWLRADMWVADVIYFPLETALLLAAKARGCATLNGGGMAVFQAARAFDLFTGKIADRERMVRDFGTI*