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SCNpilot_expt_1000_bf_scaffold_1002_curated_3

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 2568..2828

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF2C16 related cluster n=1 Tax=unknown RepID=UPI0003CF2C16 similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 81.0
  • Bit_score: 83
  • Evalue 1.30e-13
Putative transcriptional regulator {ECO:0000313|EMBL:KGJ65706.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 83.0
  • Bit_score: 85
  • Evalue 3.70e-14
phage transcriptional regulator AlpA; K07733 prophage regulatory protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 56.0
  • Bit_score: 69
  • Evalue 6.10e-10

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Taxonomy

Bradyrhizobium diazoefficiens → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGGCCGAGCGATTCATGACAATGGAGCAGGTGCGGGGCCGCGTGGCCCTGTCCAAGACTGAGATTTACCGCAAGATCAAGGCCGGGGCGTTTCCCAAGCCCGTCCCCCTGGGCACCCAGAAGGTGGCCTTCGTGGAGAGCGAGGTGGCCGCGTGGATGGACGACCGGCTGCGCGCCCGTGCCGAAGGCGAGGGGGCGGAACGGCGGTCGCAACAGGGGCGGGACGCGGTGAGCGCCCGGCCGGATCGGGCAAATGGATAG
PROTEIN sequence
Length: 87
MAERFMTMEQVRGRVALSKTEIYRKIKAGAFPKPVPLGTQKVAFVESEVAAWMDDRLRARAEGEGAERRSQQGRDAVSARPDRANG*