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SCNpilot_expt_1000_bf_scaffold_27_curated_4

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(2784..4124)

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer protein TrbL n=2 Tax=Sphingomonas wittichii RepID=A5VCM7_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 461.0
  • Bit_score: 667
  • Evalue 8.30e-189
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 461.0
  • Bit_score: 667
  • Evalue 2.60e-189
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:ABQ70043.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 461.0
  • Bit_score: 667
  • Evalue 1.20e-188

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
GTGAGTGATACCGGAATCGTCGATACCTTCCTCGACACCTTCACCAGCTATATAGATTCCGGCTTCGGCCTGCTCGGCGGCGAGGTCGGCTTCCTGTCGTCCACCCTGATCGCGATCGACGTGACCATCGCCGGGCTGTTCTGGGCCTGGGGCGCCGACGAGGACGTGATCCAGCGGCTGGTGAAGAAGACGCTCTATATCGGCGCGTTCGCCTTCATCATCGGCAATTTCCAGACGCTGGCGACGATCCTGTTCGACAGCTTCGCGGGGCTGGGGCTCAAGGCGAGCAGCGATTCCTTAAGCCTCGCGGAGTTCATGAAGCCCGGCACGATCGCCGGCAAGGGACTCGACGCTGCTCAACCGCTGATCGACGCGATGGAGGCCTATAATAGCCTCTGGTCGGTGTTCGCCAATCTGGCGATCATCGCCGTGCTGCTGCTGGCCTATCTGATCGTCGTCCTCGCCTTCTTCATTATCGCCATCCAGGTCTTCATCACGCTGATCGAGTTCAAGCTGGTGACGCTGGCCGGATTTGTCCTGCTGCCGTTCGCTTTCTGGAACCGCACCGCGTTCATGGCCGAGAAGGTGCTCGGGCATATCGTCTCCAGCGGGATCAAGGTGCTGGTGCTCGCGGTCATCACCGGCATCGGCACCACACTGTTCAGCACGTTCACGGCGACGGTCGGTCCTGAACCCGATGCGCGGGAAGTGCTGGCGATCGCGCTCGGCGCGCTGTCGCTGCTCGGCCTTGCCATCTTCGGTCCCGGCATCGCCAACGGCATCGTCTCGGGCGGCCCGCAGCTCGGCGCGGGCGCCGCGGCTGGCACCGCGCTGGCGGCGGGCGGCGCGCTGGTCGGTGGCGCAGCCGCCGCGAAGCTGGGTGTGGGCGCTGCAGGGTCAGGGCTCGGCGCGGCCGGACGGATGACCGGGGCAGCCGCGCAGGCCGGCGCCCGGGCAAGCGGCGCGGCCATGGGCGCATACAGTGTCGGCTCGTTCGGCAAGACGGGCGGCAGCGCCGTGGAGGGCGGCATGGCCGCTGTCGGACAGAAGACGGCGGGCGCCGCCGCCCATGCCGCCATGTCGCCGCTGCGCAAGGCCAGCGCATCCATGAAGGATAATTTCCGCTCCGGCGTGCGTGCCGGGCTGGGCGCAGCCCCCACCGCAAGTGCCGGCACGGCTGGGGCAACACCCGCCGCCCCGGCTTCCACGCAGCCCGCATGGGCGGCAGCCATGAAGAACCGCCAGTCCACCAGCCACGGCGCGACCGTTCTCGCCCACACGATGAAGGCGGGCGACAGTCATGGCGGCGGTTCCGGACCCGACATCAAGGACAAGGACTAA
PROTEIN sequence
Length: 447
VSDTGIVDTFLDTFTSYIDSGFGLLGGEVGFLSSTLIAIDVTIAGLFWAWGADEDVIQRLVKKTLYIGAFAFIIGNFQTLATILFDSFAGLGLKASSDSLSLAEFMKPGTIAGKGLDAAQPLIDAMEAYNSLWSVFANLAIIAVLLLAYLIVVLAFFIIAIQVFITLIEFKLVTLAGFVLLPFAFWNRTAFMAEKVLGHIVSSGIKVLVLAVITGIGTTLFSTFTATVGPEPDAREVLAIALGALSLLGLAIFGPGIANGIVSGGPQLGAGAAAGTALAAGGALVGGAAAAKLGVGAAGSGLGAAGRMTGAAAQAGARASGAAMGAYSVGSFGKTGGSAVEGGMAAVGQKTAGAAAHAAMSPLRKASASMKDNFRSGVRAGLGAAPTASAGTAGATPAAPASTQPAWAAAMKNRQSTSHGATVLAHTMKAGDSHGGGSGPDIKDKD*