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SCNpilot_expt_1000_bf_scaffold_27_curated_22

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(19982..20863)

Top 3 Functional Annotations

Value Algorithm Source
RepA replication protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GSL6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 293.0
  • Bit_score: 531
  • Evalue 4.70e-148
RepA replication protein {ECO:0000313|EMBL:EQB02953.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 293.0
  • Bit_score: 531
  • Evalue 6.50e-148
putative replication protein A similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 289.0
  • Bit_score: 474
  • Evalue 2.10e-131

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Taxonomy

Sphingobium baderi → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGAAACCGCGCGACGCTTCCCGTTCCGCCAAACGCGCGCAACTCGCCCTGTTCCCGTCGCTCGGCTACGACATCGCGCCGCGCGACGCCCAGGACCTCATGGCCTGGCCGTTCTTCAGCCTCGCCAAGCGCAGACGGGTGACGCCGATCGACTTCCGTATGGGCGCGACCTGGATTTCGGTCGAAGCCGTTCCCGAGCACGGCATGGCGACCATCTGGGACGCCGACGTGCTGATATGGGCGGCGAGCCAGATCATCGCCGCGCGCGACGCTGGCCTGCCGACCTCGCGGCTGATGGCGACGACCCCGCACGAAATCCTCACCTTCACCGGGCGGGGCACCGGCAAGGACCATTACGACCGACTGAAGGCCGCGCTCGACCGGCTGCAATCCACCACGGTCGCCACCTCGATCCGCCAGCACCATCAGCGCCGCCGTCATCGTTTCTCCTGGATCAACGAATGGCAGGAGCGGCTCGACGGTGAGGGCCGGCCGCTCGGCATCGAACTGATCCTGCCCGACTGGTTCTATGCCGGCGTGGTCGATCGCACGTTCGTGCTCACCATCGACCGGGCCTATTTCGACCTGACGGGCGGGCTCGAACGCTGGCTCTACCGGATCGTGCGCAAGCATGGCGGCCAGCAGGCAGGCGGCTGGAGCTTCGACCTTCCTCACCTTCATCTCAAATCCGGCGCGCTCTCGCCGCTTAAGCAATTCGCGTTCGAGCTGCGCGGCATCGTCCGGCGCCAGTCCCTGCCGGGCTACGCGTTGGCGATCGAGCGTGCGTTCGGGCGCGAGCGGCTGACCTTCGCGCCGGTGCCCGCCGATCCGTTCGAGAAGGCGGCGCGGCGCATGGGGCTGGCTGTGGATAACCGGTCATGA
PROTEIN sequence
Length: 294
MKPRDASRSAKRAQLALFPSLGYDIAPRDAQDLMAWPFFSLAKRRRVTPIDFRMGATWISVEAVPEHGMATIWDADVLIWAASQIIAARDAGLPTSRLMATTPHEILTFTGRGTGKDHYDRLKAALDRLQSTTVATSIRQHHQRRRHRFSWINEWQERLDGEGRPLGIELILPDWFYAGVVDRTFVLTIDRAYFDLTGGLERWLYRIVRKHGGQQAGGWSFDLPHLHLKSGALSPLKQFAFELRGIVRRQSLPGYALAIERAFGRERLTFAPVPADPFEKAARRMGLAVDNRS*