ggKbase home page

SCNpilot_expt_1000_bf_scaffold_353_curated_14

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(14334..15809)

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ17_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 491.0
  • Bit_score: 737
  • Evalue 9.30e-210
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 491.0
  • Bit_score: 737
  • Evalue 2.90e-210
Secretion protein HlyD {ECO:0000313|EMBL:ABF54255.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 491.0
  • Bit_score: 737
  • Evalue 1.30e-209

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
ATGAAGCTCGAACTTTCGCCCCGGGCGCGGCTCGGCGCAGCGGCAACAGCCATCGCGCTTGTCGCGGCCGCTGCAGGCTACGGCGTGGCCTCCCTTGACGGCAGCAGGGCAAGCACATCCGGAGCGACCGCGGACGATCGCGAAGTGCTCTACTGGTACGACCCGATGTACCCCAACCAGCATTTCGACAAGCCGGGCAAATCGCCGTTCATGGACATGGAGCTGGTCCCCAAATATGCCGGTGAGGCAGGCGATGCGGCAGGCGTGCGCATCGACCCCGCGCTCGTCCAGAGCCTGGGGTTGCGCACCGCTGAGGCGCATCGCGGAACGCTGGGCAGCGGCCTGACCGTCACCGGCACGATCGGTTACAACGAACGTGACATCGCCATCGTCCAGCCGCGTGCGAGCGGCTTTGTCCAGCGTACCTATAACCGCGCGCCCGACGACGTGATCGGCGCGGGCGCACCGCTCGTCGATCTCCTCATTCCCGATTGGGGCGGCGCGCAGGAAGAATATCTCGCCGTGCGCCGCACGGGCGACCAGGCGCTCGCCAGCGCCGCGCGGCAGCGGCTGGTCTTGCTGGGCATGCCGCCGTCCACCATCGCAGCGGTCGAACGGAGTGGAAGGCCCCGCACCGTCATCACCATTGCCTCGCCCATTGCCGGCACGATCAAGTCCCTGGCCGTCCGGCCGGGCATGAGCGTGATGGCAGGCCAGACGCTTGCCGAGATCAATGGGCTCGGCACGGTCTGGCTTGACGCCGCCGTTCCCGAAGCGATGGCGGCGCAGGCACGGCCCGGCAGACCCGTTACGGCGATCCTGACGGCCTTCCCCGGCGAGACATTCCCGGGGCAGGTACGCGCGATCCTCCCGCAGGCGGAGACCGAAAGCCGGACTATCACCGCGCGCATCGAGCTTGCCAATCGTGGGGGACGGTTGCGGCCGGGCATGTTCGCGACCGTGAACTTCGCAGGCGCGCCCCGTTCGGCGCTGCTTGTTCCGTCCGAGGCGGTCATCCGCACCGGGAAGCGTGCGCTGGTGATGCTCGCGCTGGACAAGGGCCGCTATCAGCCAGCCGAAGTGAAGACCGGCCTGGAGGCGGACGGCCAGACCGAAATCCTCGCCGGACTTTCCGAGGGCGAGAAGGTCATTACTTCAGGGCAGTTCCTCATCGATTCCGAGGCCAGCCTGTCGGGAATGGACGTGCGGCCGATCGGTGGTGCGGCGGCGCCCCAGGCAGCCAAGCCGAAGACCTATACGGCGAGCGGACGGATCGAGAAGATCGCGCCGGACAGCGTCACGTTGAACCACGGACCCGTCGCTGCCCTGAACTGGCCGTCCATGACCATGCGCTTCCGGCTTGCCGATCCCGCAGCGGGGCGCGGGTTCAAGGTGGACGACAGGGTGCGCTTCACCTTCGATCAGCCGTCCGAAGGCCCAACGGTGCGCTCCATGACGCGGGAGACGGCCCAATGA
PROTEIN sequence
Length: 492
MKLELSPRARLGAAATAIALVAAAAGYGVASLDGSRASTSGATADDREVLYWYDPMYPNQHFDKPGKSPFMDMELVPKYAGEAGDAAGVRIDPALVQSLGLRTAEAHRGTLGSGLTVTGTIGYNERDIAIVQPRASGFVQRTYNRAPDDVIGAGAPLVDLLIPDWGGAQEEYLAVRRTGDQALASAARQRLVLLGMPPSTIAAVERSGRPRTVITIASPIAGTIKSLAVRPGMSVMAGQTLAEINGLGTVWLDAAVPEAMAAQARPGRPVTAILTAFPGETFPGQVRAILPQAETESRTITARIELANRGGRLRPGMFATVNFAGAPRSALLVPSEAVIRTGKRALVMLALDKGRYQPAEVKTGLEADGQTEILAGLSEGEKVITSGQFLIDSEASLSGMDVRPIGGAAAPQAAKPKTYTASGRIEKIAPDSVTLNHGPVAALNWPSMTMRFRLADPAAGRGFKVDDRVRFTFDQPSEGPTVRSMTRETAQ*