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SCNpilot_cont_300_bf_scaffold_904_curated_8

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(6813..8075)

Top 3 Functional Annotations

Value Algorithm Source
carbohydrate-selective porin OprB n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488A8F similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 378.0
  • Bit_score: 233
  • Evalue 4.90e-58
carbohydrate-selective porin oprb; K07267 porin similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 371.0
  • Bit_score: 214
  • Evalue 7.40e-53
Tax=BJP_08E140C01_Xanthomonadales_64_42 similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 355.0
  • Bit_score: 225
  • Evalue 1.40e-55

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Taxonomy

BJP_08E140C01_Xanthomonadales_64_42 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGATAGCGAAGAATTCTGCGTGGATTTCGGCCTTCGCAATGAGCTTCGTGCTGGCGAGCCCGGCTTTCGGCCAGGCGCAACCGGTAGCCGACCCCACCAAGGCGGCCAATCAGCCCGCCGGACCACCCCAGGATAAGCCGCCCGCGCCGTCACCATCTCCCTTCACGTTTACCGTCAATTACGATCTCGATCTGCTGGACAATCTAAGCGGCGGGCGGTCACGGGGGATAGGCCATGCCGACCTCCTGAAGGGCTCGCTTGGCTATGACGGGAACCTGCAAGGGCATGAGGGACTGAGTGCGCTCGTCAGCCTCGAGCACAGCTTTGGTTCCGACTTCACCCCGCGGCGCATCGGCGGCTTCCAGGCTGTCACATCGATCGAGGCGCATCCCGCCGCAACACGGCTCTATGAAGCCTGGGCGCAGCAGGATTTTCTCCAGGGCCGGGCCGGGGTCAAGGTCGGGCTTATCGACCTCAACACCACTTTCGACGTCCAGGAGACAGCGGCGCTGTTTCTGAACGCGGCCGATGGCACGGGCACCGACCTCGCCGACACCGGGGTCAACGGCCCGTCGATCTATCCTACCACTGCCGCCGCGATCACTGGTTTCTGGCGCCCGAATAGCGACTGGACGCTGCAACTTGGCGTCTTCGATGCGACGGCGGGGGATCCGCGTCACCGATCGGATTTCGTTGCCGTAAAGCTTCGCGGCGCGCTGGTCATTGCGCAGGTCGAGCGCCGGTTCGGCGATACGGCGCGTGTCGAAGTCGGGGCATGGGACTATACCAACAGCTTCCCGGCGCTCGACCGCCTCGGCCCGGATGGCGCGCCGCGTCATGTTCATGGAAATGCCGGCGCCTATGGCCTTATCGAAGGCCGGCTTCTCAAACGCGGCGAGGAAGGGGAGGGGCTCAGCGGATGGTTGAGGATCGGATTTGCCAATGGCGATATCAACCCTGCGCGCCGTTATTTAGGCGCGGGTCTCGTCTACATTGGGCCAATTCCCGGTCGCGACAAGGATGAGGCGGGCGTTGCGGTCACCGACGTCGGATTTGGTGGAGGCGCGCGCGTCGCCGCCCTGCAGGAAGGGCGCCAGGCGACGGGGCATGAGACCGTGGTCGAGGCGACATATCGCTATGCCTGGAAGGACTGGCTCGCCGTCCAGCCCGACGTGCAATATGTCATCCGTCCGCATGGTGACCGGCACATCGACAATGCACTGATGATCGGCGTTCGGCTGGCTTTTACCTGGTCGAAGTAA
PROTEIN sequence
Length: 421
MIAKNSAWISAFAMSFVLASPAFGQAQPVADPTKAANQPAGPPQDKPPAPSPSPFTFTVNYDLDLLDNLSGGRSRGIGHADLLKGSLGYDGNLQGHEGLSALVSLEHSFGSDFTPRRIGGFQAVTSIEAHPAATRLYEAWAQQDFLQGRAGVKVGLIDLNTTFDVQETAALFLNAADGTGTDLADTGVNGPSIYPTTAAAITGFWRPNSDWTLQLGVFDATAGDPRHRSDFVAVKLRGALVIAQVERRFGDTARVEVGAWDYTNSFPALDRLGPDGAPRHVHGNAGAYGLIEGRLLKRGEEGEGLSGWLRIGFANGDINPARRYLGAGLVYIGPIPGRDKDEAGVAVTDVGFGGGARVAALQEGRQATGHETVVEATYRYAWKDWLAVQPDVQYVIRPHGDRHIDNALMIGVRLAFTWSK*