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SCNpilot_cont_300_bf_scaffold_904_curated_26

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(28206..28883)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Sphingobium RepID=UPI000262B7AE similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 222.0
  • Bit_score: 323
  • Evalue 1.90e-85
Transcriptional regulator {ECO:0000313|EMBL:KFD27663.1}; Two-component response regulator {ECO:0000313|EMBL:KEZ14389.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 222.0
  • Bit_score: 323
  • Evalue 2.70e-85
response regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 223.0
  • Bit_score: 271
  • Evalue 2.10e-70

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
GTGAAGCTTCTATTGCTCGAAGACGACGAGGAGGTGCGCGACCGTGTCAGCCGCATGCTTCGCGCTGCTGGTCATGTCGTCGATGCGTGCAGGACCGGGCCCGATGCGATCTTCCTTGGCACCAGCGAGCCTTATGCGGTGCTGATCCTCGATCGCATGGTTCAGGGCGTCGACGGCCTCAGCGTGCTAAAGGCCATACGGGCTGCCGGAATTCAAACGCCCGCGCTGTTCCTGACCGCAATGGACGAAGTCGTCGACCGCGTCGAAGGCCTTGAAGCCGGTGCCGATGATTATCTGGTGAAACCCTTCGCGGCGACGGAACTGCTGGCACGGGTCAATGCACTGGGCCGGCGGCAGGCACTTTCTCAAGCGGTCACGCACCTTAAGGTCGCCGACCTCGAACTCGACCTGCTCAAGCGCACCGTGACGCGGGCCGGCAAACGGATCGAACTCCAGCAGCAGGAATATAAGCTCCTGGAATTCCTGATGCGGCACGCCGGCGAGATCGTCACGCGGGCAATGCTGCTTGAAAATGTCTGGTCGTTCCACTTCGAGCCCGGCACCAATCTCATCGAGAGCCATATGAGCCGTCTGCGCGCCAAGGTGGACCGGGGCTTCGATCGCGACCTCATCCATACGGTGCGCGGTGCGGGATACCGGCTCGATGCGCAAGCTTAG
PROTEIN sequence
Length: 226
VKLLLLEDDEEVRDRVSRMLRAAGHVVDACRTGPDAIFLGTSEPYAVLILDRMVQGVDGLSVLKAIRAAGIQTPALFLTAMDEVVDRVEGLEAGADDYLVKPFAATELLARVNALGRRQALSQAVTHLKVADLELDLLKRTVTRAGKRIELQQQEYKLLEFLMRHAGEIVTRAMLLENVWSFHFEPGTNLIESHMSRLRAKVDRGFDRDLIHTVRGAGYRLDAQA*