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SCNpilot_cont_300_bf_scaffold_904_curated_30

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: 34402..35070

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA110 similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 222.0
  • Bit_score: 194
  • Evalue 1.00e-46
Two-component response regulator {ECO:0000313|EMBL:EIZ80882.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 221.0
  • Bit_score: 183
  • Evalue 2.50e-43
qseB; DNA-binding transcriptional regulator QseB; K07666 two-component system, OmpR family, response regulator QseB similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 219.0
  • Bit_score: 174
  • Evalue 4.50e-41

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCGGTTGTTGCTCGTCGATGATGACCAGGCATATGCCGCCTCGCTGCGCGCGGCATTGGCCGATCGGGAAATCACAGCTGAGATCGTGCGCAGCGGATCTGACGCGACTCATCTCCTCTCCACGACCTTGTTCGCCGCCATCATCCTCGATCTCTCTTCTCCGCTCGAGGACGGAACCGCCCTCGTTCGCCAATGGCGCGCGGCTGGTCACAGCGAGCCAATCCTTGTCGTCAGCGGACTCGACGATGCCGCGAAACGCATATCGGCGCTGCGCGCCGGTGCTGACGATTATCTGGTAAAACCATTTGTCGTCGACGAGCTCCATGCGCGGATCGATGCGATCGTGCGCCGCAGAGATGGCTTCCCTGACCCGTCGATTCGCGCGGGTGCGCTCACTTTCGATACCATGACGCGGCAGTTGGCGATCGATGGCACTCCAGTCGACCTTTCCTCCCGCGAGGCTGACATTGCGGAAATTCTAATCCGCCGCAGCAATCGCGTGACACCGCGACGGCTGCTGGAGGATCAGCTGTTCGGATCGGGTGACGGCAGCACATCCAACGCGCTCGTGGTCTATATCTACAGGTTGCGCCGCAAGATCGAAACACCCGGGCGTGTGTCGATCCGTACATTGCGCGGGATCGGCTATATGCTGGTCGCCCACTGA
PROTEIN sequence
Length: 223
MRLLLVDDDQAYAASLRAALADREITAEIVRSGSDATHLLSTTLFAAIILDLSSPLEDGTALVRQWRAAGHSEPILVVSGLDDAAKRISALRAGADDYLVKPFVVDELHARIDAIVRRRDGFPDPSIRAGALTFDTMTRQLAIDGTPVDLSSREADIAEILIRRSNRVTPRRLLEDQLFGSGDGSTSNALVVYIYRLRRKIETPGRVSIRTLRGIGYMLVAH*