ggKbase home page

SCNpilot_cont_300_bf_scaffold_5178_curated_7

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(5581..5958)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KAT4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 122.0
  • Bit_score: 193
  • Evalue 9.90e-47
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 122.0
  • Bit_score: 193
  • Evalue 5.30e-47
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 122.0
  • Bit_score: 193
  • Evalue 1.40e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium ummariense → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGAGGGCCATGTTCGCAGTCGTGCGCACGGGCGGCAAGCAATATCGCGTCGCCGCCGGAGACAAGATCGTCGTCGAGAAGATCGAGGGCGATGCCGGATCGACGGTCACGCTCGGCGACGTGCTGCTCGCAGGCGAAGGCGCCGAGCTGAAGCCGACCAGCGGCCTCACCGTCGCCGCGGAGATCGTGGCGCAGGCGAAGGGCGAGAAGGTCATCGTCTTCAAGAAGCGTCGCCGTCACAATTATCGTCGCCGCAACGGCCATCGTCAGCAGCACACGATCCTCAAGATCGTCTCGATCGGCGCCGCCGAGAAGAAGGCTGCGAAGAAGGCCGCCGCGAAGCCCGAGGGCGATGCCGCCCAGGCCGCCGAAGCGTAA
PROTEIN sequence
Length: 126
MRAMFAVVRTGGKQYRVAAGDKIVVEKIEGDAGSTVTLGDVLLAGEGAELKPTSGLTVAAEIVAQAKGEKVIVFKKRRRHNYRRRNGHRQQHTILKIVSIGAAEKKAAKKAAAKPEGDAAQAAEA*