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SCNpilot_cont_300_bf_scaffold_748_curated_11

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(6708..8504)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 601.0
  • Bit_score: 1095
  • Evalue 0.0
elongation factor 4 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B60773 similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 603.0
  • Bit_score: 1089
  • Evalue 0.0
GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 606.0
  • Bit_score: 1066
  • Evalue 0.0

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1797
ATGACCACCCCGCTTGACCGTATCCGCAACTTCTCGATCATCGCGCACATCGATCACGGCAAGTCGACACTGGCCGATCGGTTGATCCAGCGCACCGGCGGGCTCTCCGAGCGCGAGATGTCCGCGCAGGTGCTCGACAATATGGAGATCGAGAAGGAGCGCGGCATCACGATCAAGGCGCAGACCGTGCGCCTCGAGTGGAAGGGGCATGTCCTCAACCTGATGGACACGCCGGGCCACGTCGATTTCGCTTATGAAGTGTCGCGCAGCCTCGCCGCGTGCGAGGGCGCGCTGCTGGTGGTCGATGCGGCGCAGGGGGTCGAGGCGCAGACGCTCGCCAACGTCTATCAGTCGATCGAGCACGATCACGAAATCGTGCCGGTGATCAACAAGATCGACCTCCCCGCCGCCGAGCCCGAAAAGGTGCGGCACGAGATCGAGGATATCATCGGTCTCGACGCCTCCAACGCGATCCTCGCCTCGGCCAAATCCGGGATCGGGATCGACGAGATCCTCGACGCGGTGGTCGAGCGCATCCCGGCGCCCAAGGGCGATCCCGCCGCGCCGTTGAAGGCGATGCTGGTCGATAGCTGGTACGACCCGTATCTCGGGGTGGTGATCCTCGTCCGCGTCGTCGACGGCACGCTGCGCAAGGGGCAGCAGGTGACCTTCATGCAGGCGGGGACGCAGCATCTGGTCGATCGCGTCGGCTGCTTCCGCCCCAAGATCGAGCAACTGACCGATCTCGGCCCGGGCGAGATCGGCTTCATCACCGCGCAGATCAAGGATGTCGCGCAGGCGCGCGTCGGCGACACGCTGACCGACGCCAAGCGCCCCGCGACCGAGGCGTTGCCGGGGTTCAAGGAAGTCCAGCCGGTGGTGTTCTGCGGGCTGTTCCCGGTCGACGCCAACGACTTCGAGAAATTGCGCGAATCGATCAGCAAGCTCAGGCTCAACGACGCCTCGTTCAGCTTCGAGATGGAAACCTCGGCGGCTTTGGGCTTTGGCTTCCGCTGCGGCTTCCTCGGGCTGCTGCATCTGGAGATCATCCAGGAGCGGCTGACCCGCGAATACGACCTCGATCTCATCACCACCGCGCCGAGTGTGGTCTATCAGATCGAGCTGACCCACGGCGGCGGGCATATCGAGCTGCACAACCCGGCCGACATGCCCGATCCCAACAAGATCGAGACGATCAGCGAGCCGTGGATCGACGCGACGATCTACGTGCCCGACGAATATCTCGGCTCGATCCTCAAATTGTGCCAGGACCGGCGCGGGATCCAGAAGGACCTCACTTATGTCGGCGGACGCGCGCAATTGCGCTACGAACTGCCGCTCAACGAAGTGGTGTTCGATTTCTACGACCGCCTGAAGTCGATCAGCCGCGGCTATGCCAGCTTCGACTATCACCAGATCGGCTATCGCGAGGGGGACCTCGTCAAGATGTCGATCCTGGTCAATGCCGAGCCGGTCGACGCGCTGAGCATGATCGTCCACCGCGCCTCGGCCGAGACGCGTGGGCGTGGAATGTGCGAGCGGCTCAAGGATCTGATCCCGCGGCATCTGTTCAAGATCCCGATCCAGGCGGCGATCGGCGGCAAGGTGATCGCGCGCGAGACGATCGCCGCGCTGCGCAAGGACGTCACCGCCAAATGCTATGGCGGCGATATCACGCGTAAGCGCAAGCTGCTCGAGAAGCAGAAGGAAGGTAAGAAGCGGATGCGCGAATACGGGTCGGTGCAGATTCCGCAGGAAGCCTTCATCGCCGCGCTGCGGATGGGCGACGAGGGGTGA
PROTEIN sequence
Length: 599
MTTPLDRIRNFSIIAHIDHGKSTLADRLIQRTGGLSEREMSAQVLDNMEIEKERGITIKAQTVRLEWKGHVLNLMDTPGHVDFAYEVSRSLAACEGALLVVDAAQGVEAQTLANVYQSIEHDHEIVPVINKIDLPAAEPEKVRHEIEDIIGLDASNAILASAKSGIGIDEILDAVVERIPAPKGDPAAPLKAMLVDSWYDPYLGVVILVRVVDGTLRKGQQVTFMQAGTQHLVDRVGCFRPKIEQLTDLGPGEIGFITAQIKDVAQARVGDTLTDAKRPATEALPGFKEVQPVVFCGLFPVDANDFEKLRESISKLRLNDASFSFEMETSAALGFGFRCGFLGLLHLEIIQERLTREYDLDLITTAPSVVYQIELTHGGGHIELHNPADMPDPNKIETISEPWIDATIYVPDEYLGSILKLCQDRRGIQKDLTYVGGRAQLRYELPLNEVVFDFYDRLKSISRGYASFDYHQIGYREGDLVKMSILVNAEPVDALSMIVHRASAETRGRGMCERLKDLIPRHLFKIPIQAAIGGKVIARETIAALRKDVTAKCYGGDITRKRKLLEKQKEGKKRMREYGSVQIPQEAFIAALRMGDEG*