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SCNpilot_cont_300_bf_scaffold_748_curated_21

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: 16776..17873

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 362.0
  • Bit_score: 586
  • Evalue 2.10e-164
rluC; ribosomal large subunit pseudouridine synthase C; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 365.0
  • Bit_score: 550
  • Evalue 4.90e-154
pseudouridine synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B367B2 similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 359.0
  • Bit_score: 606
  • Evalue 2.40e-170

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
ATGAGCGACGCCGTCCGCCAGTTCACCGTCGCGCCCGATGACGACGGCATCCGCGTCGATCGCTGGTTCAAGCGGCATTTGCCCGACACCAGCTTCACGATCGTCGCCAAATGGGCGCGCACCGGGCAGCTCCGGCTCGACGGCGCGCGGGTCGGCCCGGGCGATCGTGTCGCCGCCGGGCAAGTGCTGCGCGTGCCCCCGGCCGAGCCGGTGCGCGCCGACGCGCGGCCGGTGCGCCAGCGCCCGACCTTGTCCGAGGACGAAGTGGCGTTCGCGCGCGAGATGGTGATCCACAAGGACGATGCCGCGCTGGTGCTCAACAAGCCCCCCGGCCTTGCGACCCAGGGCGGCACCAAGACCACCGCACATGTCGACGGCCTGCTCGATGCGCTCTCCTTCGAGGCGGAGGGGCGGCCCAAGCTGGTCCACCGGCTCGACAAGGATACATCGGGCGCGTTGCTCGTCGCGCGCACCGCGCGGGCGGCGGCGTTCTTCGCCAAATCCTTCTCCGGGCGCTCGGCGAAGAAGGTCTATTGGGCGCTGGTGGTCGGCGTGCCCTCGATCGAGGACGGCACGATCGACCTGCCGATCGCCAAGCAACCCGGCACGGGCGGCGAGAAGATGCATGTCGACGAGGCCGAGGGCCAGCCCGCGCGCAGCCGCTATCGCGTGATCGAGCGCGCCGGCAACCGCGCCGCCTGGGTCGAGCTCCAGCCCTTCACCGGGCGCACGCACCAGCTCCGCGTCCATATGGCGGCGATCGGCCGCCCGATCCTGGGCGACGGCAAATATGGCGGGCAGGCCGCGTTCCTGACCGGCGGGATCAGCCGCAAGATGCACCTCCACGCACGGCGCATCCGCGTCGATCACCCCGATGGGGCCAAGATCGACGTCACCGCCGAGCTGCCGCACCATTTCGCGGAAAGCCTCGCCGGGCTCGGCTTCGACGCGGCGGCGGGGGACAATCTGCCCCCCGACACCCCGCCCCCGCCGACCCGCGAGACGCAAAAGGCCAAGGCGCGCGCGCATGCCAAGACGGTGCGCAAGGCGCGCCGCGGCGAGCGCCGCTCGCGCGGCCCGGGCGCTGGACGCGGCTGA
PROTEIN sequence
Length: 366
MSDAVRQFTVAPDDDGIRVDRWFKRHLPDTSFTIVAKWARTGQLRLDGARVGPGDRVAAGQVLRVPPAEPVRADARPVRQRPTLSEDEVAFAREMVIHKDDAALVLNKPPGLATQGGTKTTAHVDGLLDALSFEAEGRPKLVHRLDKDTSGALLVARTARAAAFFAKSFSGRSAKKVYWALVVGVPSIEDGTIDLPIAKQPGTGGEKMHVDEAEGQPARSRYRVIERAGNRAAWVELQPFTGRTHQLRVHMAAIGRPILGDGKYGGQAAFLTGGISRKMHLHARRIRVDHPDGAKIDVTAELPHHFAESLAGLGFDAAAGDNLPPDTPPPPTRETQKAKARAHAKTVRKARRGERRSRGPGAGRG*