ggKbase home page

SCNpilot_cont_300_bf_scaffold_818_curated_21

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(19963..20805)

Top 3 Functional Annotations

Value Algorithm Source
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 279.0
  • Bit_score: 507
  • Evalue 1.60e-140
hemF; coproporphyrinogen III oxidase (EC:1.3.3.3); K00228 coproporphyrinogen III oxidase [EC:1.3.3.3] similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 279.0
  • Bit_score: 465
  • Evalue 1.20e-128
coproporphyrinogen III oxidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B776C7 similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 280.0
  • Bit_score: 519
  • Evalue 3.00e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGCAACCGCTTGACGAACAACAATCCACCGCGCGTGCCTGGTTCGAGCAACTCCGCGATCTGATCTGCGCCGAATTCGAGGCGATCGAGCGCGAGGCCGGGTCCGACGCGCGGTTCGATTATATCGCCTGGGATCGCGCCGATCCGAGCGGCGCGCCGGGCGGCGGGGGGGTGCGCGGGGTGATGAAGGGCCGCGTGTTCGAGAAGGTCGGGGTCAACGTCTCGACCGTCGGCGGCGTGTTCGAGGGCGAATTCGGCAAGACGATCCACGGCGCCGCCGAGGACCCGCGTTTCTTCGCCACCGGGATCAGCCTCGTCGCGCATATGGCCAACCCGCACGTCCCCGCGGTGCATATGAACACGCGTTTCCTGGTGACCACCAAGCGCTGGTTCGGCGGCGGGGCGGATCTCAACCCGCCGCTGCCGGTGGCCGAGGATACCGAGGATTTCCACGCCACGCTGAAGGCCGCCTGCGATGCGCACGACCCGGTGCATTATCCGCGCTTCAAAAAGTGGGCGGACGATTATTTTTATATCCCGCATCGCAAGGTGCATCGCGGGGTGGGCGGGATCTTCTACGATCATCTCGAGGGCGATTTCGCGACCAATTTCGCCTTCACCCAGGATGTCGGGCGCGCGTTTCTCGCGGTTTTCCCGCGTATCGTGCGGCGGCGGATGGGGCTGCCGTTCACCGAGGCGGAGCTGGCCGCGCAGCGCGAATGGCGTGGGCGCTATGCCGAATTCAACCTCGTCTACGATCGCGGCACATTGTTCGGGCTCAAGACCGGGGGCAATATCGACGCGATCCTGATGAGCCTGCCCCCGCTCGCGACCTGGAGCTGA
PROTEIN sequence
Length: 281
MQPLDEQQSTARAWFEQLRDLICAEFEAIEREAGSDARFDYIAWDRADPSGAPGGGGVRGVMKGRVFEKVGVNVSTVGGVFEGEFGKTIHGAAEDPRFFATGISLVAHMANPHVPAVHMNTRFLVTTKRWFGGGADLNPPLPVAEDTEDFHATLKAACDAHDPVHYPRFKKWADDYFYIPHRKVHRGVGGIFYDHLEGDFATNFAFTQDVGRAFLAVFPRIVRRRMGLPFTEAELAAQREWRGRYAEFNLVYDRGTLFGLKTGGNIDAILMSLPPLATWS*