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SCNpilot_cont_300_bf_scaffold_30486_curated_1

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: 1..321

Top 3 Functional Annotations

Value Algorithm Source
carnitine dehydratase n=1 Tax=Cupriavidus sp. WS RepID=UPI000380FC79 similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 106.0
  • Bit_score: 82
  • Evalue 2.70e-13
Uncharacterized protein {ECO:0000313|EMBL:EQB15939.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 106.0
  • Bit_score: 82
  • Evalue 5.00e-13
acyl-CoA transferase/carnitine dehydratase similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 106.0
  • Bit_score: 80
  • Evalue 3.20e-13

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Taxonomy

Sphingobium lactosutens → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
TATCTCAGCGCCATCGGCGTGCAGGCTGCGCTTCTGCGCCGGGCGACCGAAGGCGGCAGCTACCGCGTCTCCGTCAACCTTGCCCAGACGATCATGTTGCAGCAGGCGATCGGCCTCATCGATGGCGCGACGCTGCTGAAGCATGACGACCTCGGGCCGGAGCATCAGCCGCTGCCGCCGAACCTGCAGACCGGCCCGACCGCGTTCGGCGAATTCACGCGTCTCGGCTCGCAGATCGAGATGTCGAGGACGCCCGAATACTGGGCGGACCCGATGGTCGAGCCCATCGGCTCCAGCAAGCCGGTCTGGCTGCCGCGCTGA
PROTEIN sequence
Length: 107
YLSAIGVQAALLRRATEGGSYRVSVNLAQTIMLQQAIGLIDGATLLKHDDLGPEHQPLPPNLQTGPTAFGEFTRLGSQIEMSRTPEYWADPMVEPIGSSKPVWLPR*