ggKbase home page

SCNpilot_cont_300_bf_scaffold_910_curated_26

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: 27837..28778

Top 3 Functional Annotations

Value Algorithm Source
Putative DNA-binding transcriptional regulator n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q2T1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 312.0
  • Bit_score: 445
  • Evalue 4.70e-122
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CCM78940.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 312.0
  • Bit_score: 445
  • Evalue 6.60e-122
LysR substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 295.0
  • Bit_score: 334
  • Evalue 2.80e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium mesoamericanum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGCTTGAAGCCATCACGCTCGATCAGATGCGCACATTGGTCGCCGCGGCCGACGAAGGGAGCTTCTCGGCGGCGGCGCGAAAGCTCGATCGCGCGCAATCGGTTGTCAGCCAGACGATCTCGGGGCTCGAGGTGCGGCTCAAAGTGACCTTGTTCGAGCGGGAAGGGCGCTATCCGATCCTCACCGAGGCGGGTGCTGCCTTGGTCAATGAGGCGCGTGCGGTGCTGCGCCAGGCCGACCAGTTCAAGGCGCGCGCGCGCGATCTCGCCAGCGGGGTCGAGCCCGAACTGTCGATCGCGCTCGACGTGATGTTCCCCATCGAATTGTTCACCGCCGCGGTCAGCGATTTCGAGACGATGTTCCCCGATACCGCGCTGCGGGTGTACGTCGAAAATCTCGGCGCGGTGATCCAGCCGGTGCTCGACCGGCGCTGCTCGCTCGCGGTATCGGGCACCCTGCCGCTGTTCCCGCCCGAGCTGGCGCGCGAACGGCTGATCGCGCTTCGCCTCGTTCCCGTCGCCGCGCCGGCGCATCCGCTGGCGCGCGCACCGCATCCGTTGTCGCGCGACGACCTTGCCGGGCATATCCAGCTCGTGCTGACCGATCGCTCCACGCTATCCGACGGCAAGCAATATGGCGTCCTCGCGACGCGAATCTGGCGGCTGGCCGATCTCGGCGCGAAACACGCCTTCCTGCGCGCCGGGCTCGGCTGGGGGAGCATGCCGTGGCCGATGGTTTACGGCGATCTTCAGTCCGGCCGGCTGGTCGAACTCGATATCGAGCGCGACACCTGGCCCGAGGGCGATCAGCTCGCGATGTTTGCGCTCCATCGCCACGACGCGCCGCCCGGCCCGGCCGGCCGCTGGCTGATCGAGCGCTTGCGCGATCGCGTGCTGCAATGCCCGGAACAACGCGCGGGCGGGCCGGCCGCCGGGGGTTAG
PROTEIN sequence
Length: 314
MLEAITLDQMRTLVAAADEGSFSAAARKLDRAQSVVSQTISGLEVRLKVTLFEREGRYPILTEAGAALVNEARAVLRQADQFKARARDLASGVEPELSIALDVMFPIELFTAAVSDFETMFPDTALRVYVENLGAVIQPVLDRRCSLAVSGTLPLFPPELARERLIALRLVPVAAPAHPLARAPHPLSRDDLAGHIQLVLTDRSTLSDGKQYGVLATRIWRLADLGAKHAFLRAGLGWGSMPWPMVYGDLQSGRLVELDIERDTWPEGDQLAMFALHRHDAPPGPAGRWLIERLRDRVLQCPEQRAGGPAAGG*