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SCNpilot_cont_300_bf_scaffold_910_curated_28

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(30095..30637)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1S2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 172.0
  • Bit_score: 156
  • Evalue 1.90e-35
HTH-type transcriptional regulator {ECO:0000313|EMBL:KGB53094.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 171.0
  • Bit_score: 160
  • Evalue 2.40e-36
putative transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 176.0
  • Bit_score: 128
  • Evalue 2.30e-27

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
GTGCAGATCGTCAGCGCCGATTTCCGCCGCAGCGAGCTGGCGCAAGCATTGGCGCACGGCGAGGTCGATATGGCACTCGACATCGCCAGCGAGGCGACCGCGACATTGCGCACCGCGCCGCTGCGCAGCGACCGGCTGGTCGTCGCGGCACGGCACGGTCATCCGCGCATCCACGGCGCCGTGACGCTGGAAGCCTATCTCGCGACGGGCCATGTGATCGCCTCGCCGCGACCCGCCGGGCTCGGCCCGGAGGACAATGCGCTGGCCGAAGCCGGCGCCGAGCGACGGATCGTCGCGCGCTGCCAGCATGTCGCGACTGCGTGGAATATCGTCGCCGGGTCGGATCTGATCCTCACCTTGCCGCTCTCGCACGCCGAATCGCTGCGCAAGTTCGTCGATCTGCAATTGCTGCCGCTGCCGGTCGAGGTCGTGCCGCGCGCGCTCAATCTCTATTGGCATGAGGTGGCGGATCGCGATCACGGCAATGCGTGGCTGCGACAGGTGATCGTCGATGTCGCGTCTGTTCATGCACCAGATTCATAG
PROTEIN sequence
Length: 181
VQIVSADFRRSELAQALAHGEVDMALDIASEATATLRTAPLRSDRLVVAARHGHPRIHGAVTLEAYLATGHVIASPRPAGLGPEDNALAEAGAERRIVARCQHVATAWNIVAGSDLILTLPLSHAESLRKFVDLQLLPLPVEVVPRALNLYWHEVADRDHGNAWLRQVIVDVASVHAPDS*