ggKbase home page

SCNpilot_cont_300_bf_scaffold_23765_curated_1

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(83..1858)

Top 3 Functional Annotations

Value Algorithm Source
YD repeat-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S464_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 580.0
  • Bit_score: 454
  • Evalue 1.50e-124
YD repeat-containing protein {ECO:0000313|EMBL:EZP56489.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 584.0
  • Bit_score: 522
  • Evalue 1.00e-144
YD repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 580.0
  • Bit_score: 454
  • Evalue 4.60e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1776
ATGGGAACGACATCTCCTACATTGCAATATATCTACGGACTTACTCGCCCTGGCAGTTCCAATGAGGATGTGACAATCACATACGACAGCTCCAAGCGAGTGGCGAGCATTGCGAATGCGACCGGGACGACTACCTACGGCTATGTTGATAGTGGCTCCTCGAGAACGACAACGGTAACGGACCCGCTGGGTCATATTACGACCTATGTATTCGACATGACGCTTCACCGTCCAACCTCCATCACCGATGCAGATGGGAAGGTATGGACAAAGCAATATGACTCCGCAGGACGTCTGTATATCGATACTGCCCCAGAAGGGAATCATACCCAGTACACCTACGATTCCCGGGGAAATGTAACGGCTATTTATGGTATATCAAAATCTATTCCTGGATATCCAAATAAGGTTACGACTCGGGGATTCGATTCTGTTTGTGTAAATGCTGCTAAGTGCAACAAGCCGAACTGGGTCCAGGATCCGAATCTCGATCGTACAGATTACTCATATGACCTTACTACCGGGAATATTCTTACTGTCCAGGCACCGGCGGCTACGACTAGCGGCCCGCGGCCGACTACGACGTTCAGCTATGCGACGGTAAACGGGGCGCAGGTTCTGTCGGGTACCTCAATCTGTCTCACGTCCGCAACATGCGTCGGTACGACGAGTGAGTCGAAGACCGCAATCGGCTATAACAGCAATGGCCTCCCGACGACGATATCTAAGCAGGCTGGCGATGGGTCAATCGTCGCGACCACGACGTTAGGGTATGACAACGTCGGCAACGTGACCAGCGTCGATGGGCCTTTGCCAGGCAGCGCCGACACCACCTATTACCGTTACGATGCGGATCGTGAAGTCGTCGGGGTTGTCGCTCCTGACCCGGATGGCGCCGGACCACTCCTGCCCAAGGCGCAGCGCAATACCTATGACGCAAAGGGTCGGGTGACCCTCGTCGAGGCGGGCACGGTGACGGACCCCAGCGATGCAGCCTGGAGCGCTTTTTCCTCGCTTCAGCAGGTCGCGGCCACATATGATGGTGTTGATCGCCCATTGACCAAGACGGTCACCGCGGGCGGTACGACATTTTCGGTAACGCAGAACAGCTACGATCATCAACGGTTGGATTGCACCGCTGTCCGAATGAACAGTGCCGCGTGGGGATCGCTGCCGCCGTCGGCTTGCACGTTGCAAACTCCCGGAACCCTCGGAGCCGATCGCGCCACAAAATTTGCTTACGACAATGCCGACCGGCTGACCAAGCGAACTTCCGCTTATGGGACAGCCGACGCTTCGGACGACGCGACAATTGCCTACACGGACAACGGTTTGCAACAGAGCGCGACTGACGCAAACGGAAATGCTACCATCTATGCGTATGACGGGTTCGATCGGCCGCTAACCACGACCTATCCGGGTGGAAGTTATGAGCAATTCAGTTATGATCAGGATGATAATCTACTGACACGGCGGCTGCGTGATGGGACGTCGATCAGCTACGCATATGATATGCTGAACCGGGTGACAACCAAGACATTGCCGTCGGGGGAGCTGGCGGTCTCGTACGGCTACGATTTGCTTGGACACATGACGGCGGCAACGCGGTCAGACGGCAACAACGTAAGCGCTGCGTATGACGCCTTGGGGCGCCAGACAAGCGTAACAACGGCGATTGGTGGCACGGTCAGTTCGCAATATGATACAGCGGGGCGACGTACGCGGCTGACCTGGACCGACGGATTTTTCGTCGCCTACGGCTACGATGCAACGTAA
PROTEIN sequence
Length: 592
MGTTSPTLQYIYGLTRPGSSNEDVTITYDSSKRVASIANATGTTTYGYVDSGSSRTTTVTDPLGHITTYVFDMTLHRPTSITDADGKVWTKQYDSAGRLYIDTAPEGNHTQYTYDSRGNVTAIYGISKSIPGYPNKVTTRGFDSVCVNAAKCNKPNWVQDPNLDRTDYSYDLTTGNILTVQAPAATTSGPRPTTTFSYATVNGAQVLSGTSICLTSATCVGTTSESKTAIGYNSNGLPTTISKQAGDGSIVATTTLGYDNVGNVTSVDGPLPGSADTTYYRYDADREVVGVVAPDPDGAGPLLPKAQRNTYDAKGRVTLVEAGTVTDPSDAAWSAFSSLQQVAATYDGVDRPLTKTVTAGGTTFSVTQNSYDHQRLDCTAVRMNSAAWGSLPPSACTLQTPGTLGADRATKFAYDNADRLTKRTSAYGTADASDDATIAYTDNGLQQSATDANGNATIYAYDGFDRPLTTTYPGGSYEQFSYDQDDNLLTRRLRDGTSISYAYDMLNRVTTKTLPSGELAVSYGYDLLGHMTAATRSDGNNVSAAYDALGRQTSVTTAIGGTVSSQYDTAGRRTRLTWTDGFFVAYGYDAT*