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SCNpilot_cont_300_bf_scaffold_24121_curated_1

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(65..964)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003614DA8 similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 288.0
  • Bit_score: 334
  • Evalue 1.50e-88
Transcriptional regulator {ECO:0000313|EMBL:EJL26732.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 295.0
  • Bit_score: 321
  • Evalue 1.00e-84
DNA-binding transcriptional regulator CynR similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 294.0
  • Bit_score: 316
  • Evalue 9.90e-84

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGCAGCTTCGTCATCTCCGCTATCTGAAGGCAATCGTCGAGGAGGGCAGCTTCACCCGGGCAGCCCAGGTCCTTCACGTCTCGCAGCCGGCGCTTTCTCATCAGGTCCGCCAGCTTGAAGAACAGCTGGGCGTGCAGTTGCTGGATCGGACCGGCCGGAAGGTACGGCCGACCGACGCAGGCACGGCATTTCTCGCGCATGCGCGCCGCGCGCTCAATGCCGTCGAGGCTGCTGGTCGCGCGGCACAAGATGTCGAAGATCTGTCGAGCGGGATGGTGCGGATCGGCGTACCCCCCAGCTTCAGCGGCTATCTGACGGCGCCACTCGTCCGGCGCTTCCTGGATCGGTATCCGGGCATCCGCCTTCACCTGGCCGACATGGCACAGGAGGATATTGAGAAAGCGCTGGGCGATGACTCAGTTGATCTCGGCATCGCCTTCAGTGACGTCCGCTCGGACGATGTCGAGTGGCAGCCCCTCCATGCCGAACGGTTGACGCTTACCATGGCCGAGGGGCACCCTGCCGAACATCTCACTGTCATCGACCGCGCTACACTCCAGAGCATGGACATGGTGCTGTTGGGGCCTGACTTCGCGACCCGGAAGCTCGTCGACGCTCATTTTCTTCGGCACGGGCTGAGGCCGCGGATCGCCGTTGAGGCGTCCGCGATGATGACCATCGTAGAGATCGTGCGGAAAAGTCGCCTCGTTACCATCCTGCCTGACGTCGTGGTCCGCGAGCAACCGGCGCTGGTCACGCGCCCAATCGAACAGCCGTTCGACCCGCGTCGCGTCGCCCTCCTCCAGCGAAGGGCAGGGTATCGCTCAGCAGCCACGCGAGCCTTTGTCGAGACGACCCAGGCCTTCGCGGCCGAGCTTGAAAATAGCGGCCGCGTGTGA
PROTEIN sequence
Length: 300
MQLRHLRYLKAIVEEGSFTRAAQVLHVSQPALSHQVRQLEEQLGVQLLDRTGRKVRPTDAGTAFLAHARRALNAVEAAGRAAQDVEDLSSGMVRIGVPPSFSGYLTAPLVRRFLDRYPGIRLHLADMAQEDIEKALGDDSVDLGIAFSDVRSDDVEWQPLHAERLTLTMAEGHPAEHLTVIDRATLQSMDMVLLGPDFATRKLVDAHFLRHGLRPRIAVEASAMMTIVEIVRKSRLVTILPDVVVREQPALVTRPIEQPFDPRRVALLQRRAGYRSAATRAFVETTQAFAAELENSGRV*