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SCNpilot_cont_300_bf_scaffold_70_curated_9

Organism: scnpilot_dereplicated_Sphingomonas_2

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: comp(6331..6915)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadC n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B45F2E similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 195.0
  • Bit_score: 173
  • Evalue 1.60e-40
DNA repair protein RadC; K03630 DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 196.0
  • Bit_score: 169
  • Evalue 1.30e-39
DNA repair protein RadC {ECO:0000313|EMBL:ABQ70814.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 196.0
  • Bit_score: 169
  • Evalue 5.60e-39

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
GTGGAACGCCTCATCGCGCCGTTCCTTGGCGAACGATCCGGCGATCTCGCGCGAACCCTGATCGCGGCGCACGGCTCGCTCGCCGCGGTGCTGAACGCGGACGAGACGCTGCTTGGCGAGGAGCTGGACGGCGACGATCGTGCCGCCGCGCTGCTCGCCCTGGCGCGCGAGATTCACCTGTTCCTGCTGCGCGAACCCATCCGGGACCGCGAGATCGTCGGCAACTATGCCGACCTCGTCGCCTATCTGCGCGCAGACCTGACGTACAAGCGCACCGAGCAGGTCCGCATACTCTTCCTCAGCTCGGCCAATCGCCTGCTCCGCGACGAGATCGTCAGCGAAGGCTGTCTCGACGAAGCGCCGCTCTATGTCCGGGACATCCTGCGCCGCGCCCTTCAGGTGGGCGCGGGCGCGATCATCGTCGTCCACAATCATCCGTCAGGGGACGCGACCCCTAGCAAGGCCGATATCGACATCACCCGGCAATTGATCGAGGCAGGCAGGACGCTGGGCGTCGTCGTCCACGATCACCTAGTCGTTGCCGGCAGCGGAATCGTCAGCATGCGGAATCTGGGGCTCATCTGA
PROTEIN sequence
Length: 195
VERLIAPFLGERSGDLARTLIAAHGSLAAVLNADETLLGEELDGDDRAAALLALAREIHLFLLREPIRDREIVGNYADLVAYLRADLTYKRTEQVRILFLSSANRLLRDEIVSEGCLDEAPLYVRDILRRALQVGAGAIIVVHNHPSGDATPSKADIDITRQLIEAGRTLGVVVHDHLVVAGSGIVSMRNLGLI*