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SCNpilot_cont_300_bf_scaffold_70_curated_46

Organism: scnpilot_dereplicated_Sphingomonas_2

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 44444..45115

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI000263088B similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 203.0
  • Bit_score: 305
  • Evalue 4.10e-80
TetR family transcriptional regulator {ECO:0000313|EMBL:AJP71799.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 203.0
  • Bit_score: 292
  • Evalue 3.90e-76
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 194.0
  • Bit_score: 262
  • Evalue 1.60e-67

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGCGGAAGGGCCGCAAGGCATTGGACTTTTGGGTCCATCAACATTATGTACCGGTCATTATGGAAATCACCGCCTGTGCCGTCGCCAAGGGGCGCCCCCGCGAATTCGACACCGACTCGGCGTTGACCGCGGCGCTGCGCGTCTTCTGGAGCAAGGGTTATGAGGGCGCCTCGCTGAGCGACCTGACCGAAGCGATGGGGATCACCCGGCCGAGCCTCTATGCGGCGTTCGGCAACAAGGAAGCGCTCTTCCGGAAGACGCTGGATCTCTATCAGCGCGAGAAGCTCGACTATATGGGCAAGGCGCTCGACGCGCCGACTGCGCGTGGCGTCGCCGAGCGGCTGCTGATCGGCGCGCTCGAGATGCAGATGAGCTCGTGCGATCCCAAGGGCTGTATGGGCGTGATCAACTCGGTGGCTTGCGGGGCCGAAGCGGAGTCGATCCGCGCCGAGGTGCTCAAGCGCGGGGCAACCGTGAAGCAGGGCCTGATCGATCGATTCGAGCGCGCCAAGGACGAAGGCGACCTGCCCGCCGATACCGACGTGATCGGGCTCACCGCCTATCTGACCGCACTGCTCCAGGGCATTGCGCTCCAGGCCGGCGGCGGCACGTCGTGCGCCGATCTTCAGGCGCTGATCGACACCAGCCTGGCCTGCTGGCCGAGCAAGTAA
PROTEIN sequence
Length: 224
MRKGRKALDFWVHQHYVPVIMEITACAVAKGRPREFDTDSALTAALRVFWSKGYEGASLSDLTEAMGITRPSLYAAFGNKEALFRKTLDLYQREKLDYMGKALDAPTARGVAERLLIGALEMQMSSCDPKGCMGVINSVACGAEAESIRAEVLKRGATVKQGLIDRFERAKDEGDLPADTDVIGLTAYLTALLQGIALQAGGGTSCADLQALIDTSLACWPSK*