ggKbase home page

SCNpilot_cont_300_bf_scaffold_70_curated_49

Organism: scnpilot_dereplicated_Sphingomonas_2

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 47244..50438

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036F2ECB similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 999.99
  • Bit_score: 1842
  • Evalue 0.0
RND transporter {ECO:0000313|EMBL:AJP71796.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 999.99
  • Bit_score: 1859
  • Evalue 0.0
putative multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 999.99
  • Bit_score: 1579
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3195
ATGCGCCTCTCGCGGTTCTTCATCACGCGCCCGATCTTCGCGGCCGTCATCGCGGTCGTGATCACGATCATCGGTGCGATCGCCTATCTCGCGCTGCCGATTTCCCAATATCCCGACATCGTCCCCCCGACGGTGACGGTCACCGCCTCCTATCCCGGCGCTTCGGCCGAGACCGTCGCCGAGACGGTCGCCGCGCCGATCGAGCAGGAGATCAACGGCGTCGACGACATGCTCTACCAGTCGTCGCAATCGACCGGCGACGGCAACGTCACCATCACCGTCACGTTCAAGTCGGGAACCAATCTCGATTCCGCGCAGGTGCTGGTGCAGAACCGCGTCGCGGTCGCGATCCCGCGCCTGCCCGAGGAAGTGCAGCGTCTGGGCGTCGTCACGCGCAAGACCACGCCGGACTTCCTGCTGGTCGTGAACCTGATCTCGCCGGACAACTCCGTCGATCGCGAATATATCTCCAACTATGCGCTGACCCAGGTGAAGGACCGCCTCGCCCGTGTCGAAGGCGTGGGCGACGTGCGCATGTTCGGCGCGCGCGACTATGCGATGCGCGTGTGGATCGATCCGGGCCGCGCCGCCGCGCTCAACCTGACGGCGGGCGACATCGTCCAGGCGCTGCGCGCGCAGAACGTCCAGGTCGCCGCCGGCACGCTCGGCCAGCCGGGCTCGACGCCGACGGGCAACGCCTTCCAGCTCAATATCGAGACGCAGGGCCGCCTGAAGGATCCCGCGCAGTTCGGCCAGGTGGTGATCCGCACCGATGCCGACGGGCACCAGGTGCGGGTGAGCGACGTGGCGCGCGTGGAACTGGGTGCGGCGGACTATTCGTCCAACACCTATCTTTCCAACAAGCCGACCGTGATCCTCGCCGTGTTCCAGCGCCCGGGCTCGAACGCCCTCGCCGCTGCCAATGCGGTGCAGGATCAGCTCAAGGCGATGTCCAAGAACTTCCCCAAGGGCCTGGAATATCGCGTCATCTACAACCCGACCGAGTTCATCGCGCAGTCGATCGACGCGGTCTATCACACGCTGGGCGAGGCGATCCTGCTCGTCGTGCTCGTCGTCATCGTCTTCCTCCAGAAATGGCGCGCGGCGATCATCCCGGTGCTTGCCATCCCGGTCTCGCTGATCGGCACGATGGCGGTGCTGCTGCCGCTCGGCTACTCGCTCAACAACCTCTCGCTGTTCGGCCTCGTCCTCGCCATCGGCATCGTCGTCGACGACGCGATCGTCGTGGTGGAGAATGTCGAGCGCAACCTGGCGCGAGGGATGACTCCGCTCCAGGCGGCGCGCACTTCGATGGACGAAGTGTCCGGCGCGCTCGTCGCGATCGTGCTGGTGCTGCTCGCGGTGTTCCTGCCGACGCTGTTCCTGAACGGCCTGTCGGGCGCCTTCTACAAGCAGTTCGCCGTGACGATCTCGGCCGCGACCGCGATCTCGCTGCTCGTCTCGCTCACCCTGTCGCCCGCCATGGCGGCGCTGCTGCTGCAGCATCACGAGGGCGAACCCCGGGGACCGATCGGCCGGATCGTGCGCCGCGGCGCCGATGCGTTCAACACCGGCTTCGAGCGGATGAGCGTCGGCTATGCCAAGCTCACCCGCGTGCTGGTCACCCGGCCGAAGCGGATGATGCTCACCTATGTCGGCCTGATCGCCGCGACGATCGGGATGTTCTGGGTGACGCCGGTGGGGTTCATCCCGCAGCAGGACCAGGGCTATTTCCTCACCGTCATCCAGCTGCCGCCGGGCTCGTCGCTCGAGCGGACGGACGAAGTGATGCGCAAGGTCGTCGCCCGTATCCTCCCGATCAAGGGCGTGAAGGGATCGGTGATGCTCGCCGGCTTCGACGGCCCGTCGCAGACGCTCGCCCCGAACTCGGCCGCCGCCTATGTGCCCCTGCTCTCCTTCGAGGAGCGCAAGAAGCTCGGGGTCACCTTTGACGGGATCATGAACGAGGCGCGCCAGCGCACCGCCGACATCAACGAGGCGATGCTGCTGGTCGTCCCGCCGCCCGTCATCCAGGGCATCGGCTCGGCCGGCGGCTACCGGATGATGATCGAGGACCGCGCCGAGCATGGCTATGACGAGCTGGGCAAGACCGCGTTCGGGCTGATCGGCCAGGCCAACCAGACTCCGGGCCTCAAGCAGATCTACACCTTCTTCAACACCGCGACGCCGCGCGTCTTCGCCGATATCGACCGGCGCAAGGCAGACATGCTCGGGGTGCCGCCGGAGCGGGTGTTCGAGGCGCTGAACGTCTATCTCGGCTCGGCGTTCGTGAACGACTTCAACATGCTCGGCCGCACCTATCGCGTGACCGCGCAGGCCGATGCGCCGTTCCGGGCGACCGAGGCGGACATCGCCAACCTCAAGACCCGCTCGAACTCGGGCGCGATGGTGCCGATCGGCTCGGTCTCGACCTTCGAGAACAAGACCGGCCCGTACCGCGTGACGCGCTACAACCTGTTCCCGGCGGTGGAAGTCGATGGCGATACCGCACCGGGCTACAGCTCGGGCGCTTCGCTCGACACGATGGAGAAGCTCGCGAGCGAACTGCCCGCCGGCTATGGCGCCGAATGGACCGGCATCGCCTTCCAGCAAAAGGCGGCCGGCAGCACGGCCGGGCTGGTCTTCGCGCTCGCGGTGGTGTTCGTCTTCCTGGTGCTGGCGGCGCAATATGAGAGCCTGACCATGCCGCTGGCGATCATCCTGATCGTGCCGATGTGTCTGCTCGCGGCGATGGCCGGAGTGAATCTGCGGGGCATGGACAATAACGTGCTCACGCAGATCGGCCTGGTCGTGCTGATCGCGCTCGCCGCCAAGAACGCGATCCTCGTGGTCGAGTTCGCCCACCAGGCGGAAGTGCAGGATGGGCTGTCGCCGGTGGAGGCCGCGGTGCGTGCCGCGCGCGACCGCCTGCGGCCGATCCTGATGACGTCGTTCGCCTTCATCCTCGGCGCCGTGCCGCTGCTGATCGCGAGCGGGGCGGGCGCGGAGCTCCGCCAGGCGCTGGGCACCGCGGTGTTCTTCGGGATGATGGGCGTGACGGCGTTCGGCCTGCTCTTCACGCCGACCTTCTACGTCGTCTGCCGCGCGCTGGGCGATCGCATCGCCAGGATGCGCGGCAACCGCAAGGCAGTCGACGAAGGCGGCCACGAGCCGGCGCTGCAGCCCGCCGAGTGA
PROTEIN sequence
Length: 1065
MRLSRFFITRPIFAAVIAVVITIIGAIAYLALPISQYPDIVPPTVTVTASYPGASAETVAETVAAPIEQEINGVDDMLYQSSQSTGDGNVTITVTFKSGTNLDSAQVLVQNRVAVAIPRLPEEVQRLGVVTRKTTPDFLLVVNLISPDNSVDREYISNYALTQVKDRLARVEGVGDVRMFGARDYAMRVWIDPGRAAALNLTAGDIVQALRAQNVQVAAGTLGQPGSTPTGNAFQLNIETQGRLKDPAQFGQVVIRTDADGHQVRVSDVARVELGAADYSSNTYLSNKPTVILAVFQRPGSNALAAANAVQDQLKAMSKNFPKGLEYRVIYNPTEFIAQSIDAVYHTLGEAILLVVLVVIVFLQKWRAAIIPVLAIPVSLIGTMAVLLPLGYSLNNLSLFGLVLAIGIVVDDAIVVVENVERNLARGMTPLQAARTSMDEVSGALVAIVLVLLAVFLPTLFLNGLSGAFYKQFAVTISAATAISLLVSLTLSPAMAALLLQHHEGEPRGPIGRIVRRGADAFNTGFERMSVGYAKLTRVLVTRPKRMMLTYVGLIAATIGMFWVTPVGFIPQQDQGYFLTVIQLPPGSSLERTDEVMRKVVARILPIKGVKGSVMLAGFDGPSQTLAPNSAAAYVPLLSFEERKKLGVTFDGIMNEARQRTADINEAMLLVVPPPVIQGIGSAGGYRMMIEDRAEHGYDELGKTAFGLIGQANQTPGLKQIYTFFNTATPRVFADIDRRKADMLGVPPERVFEALNVYLGSAFVNDFNMLGRTYRVTAQADAPFRATEADIANLKTRSNSGAMVPIGSVSTFENKTGPYRVTRYNLFPAVEVDGDTAPGYSSGASLDTMEKLASELPAGYGAEWTGIAFQQKAAGSTAGLVFALAVVFVFLVLAAQYESLTMPLAIILIVPMCLLAAMAGVNLRGMDNNVLTQIGLVVLIALAAKNAILVVEFAHQAEVQDGLSPVEAAVRAARDRLRPILMTSFAFILGAVPLLIASGAGAELRQALGTAVFFGMMGVTAFGLLFTPTFYVVCRALGDRIARMRGNRKAVDEGGHEPALQPAE*