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SCNpilot_cont_300_bf_scaffold_104_curated_2

Organism: scnpilot_dereplicated_Sphingomonas_1

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(347..1564)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MID8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 389.0
  • Bit_score: 340
  • Evalue 2.10e-90
Acyl-CoA transferase {ECO:0000313|EMBL:AKE01107.1}; TaxID=1833 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Arthrobacter picolinophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 387.0
  • Bit_score: 338
  • Evalue 1.10e-89
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 392.0
  • Bit_score: 283
  • Evalue 9.60e-74

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Taxonomy

Rhodococcus erythropolis → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGGATCGGGAAGCTTCGTCCACGGCAACGAACAAGGCGTATCTGGTGATCGAGCTCGGCCATGCATTGGTCGGCCCCTATGCAGGCGCCATTCTCAGCGACCTCGGCGCCAGGATGATCAAAGTCGAACCCCTGCAGAGCGATCTCATGCGCCTTCGGGGCAGCGCCAACAGCATCGCCTACCCGTTTCAGATGATCCATTGCGGCAAATATACCACCGCGATAGACATCAAGGATCCGCAAGGGTCCGCCCTGGTCAAGAAGATGACCGGGGAAGCCGACATCGTGGTGGAGAATTTCCGTCCCGGCGTGCTGAAGAAGTACGACCTCGACGGCGATAGCGTCCTCCGCCGTTTTCCCCATATCGTTTATTGCTCGATATCGGGCTTCGGCAAGACCGGACCGATGGCCGAGGAGCCCGGCGTCGATCTGGTCGCCCAGGGCCAGTGCGGCCTGATGAGCGTGACAGGCATGCCGGGCGAGGATCCCGTCAAGGCGGGCTTTCCCATCGCCGACCTGGGCGGCGGCATGTGGGCCGTGATCGGCATGCTCGCAGCATTGCAGCGCGCGCGCGCCACCGGCAAGGGGACCGTGATCGACGTCGCGCTGACCGACTCGGTGTTAGCGTGGTCGGTGTGGGAAGCCGCCGACTATCAGGCCACGGGGATCGTCCCGGGACCCTTGGGCAGCGCGCACCGGCTGGTTGCGCCTTATCGCGCCTATGAATGCGCCGGCGGACATTGGATCAACGTCGCCGGATTGCATACCCGATGGCGGGAGCTTTGCCTGCTGCTGGAGGCGCCCAACCTCCTCAACGATCCGCGCTTTGCCTCGGAAAGCGCCCGCTACGACAATCGCGAGTTGCTCGACGCGACGCTGGCGCCACGCTTCCTGACGCGGGGACGGGAGGACTGGCTCGGCGCGCTCCGTGCGCTGGGTATCCCATGCGGGCCGATCAACGACCTGAGCCAGACGATGTCCGACGCCCAGTTCATCGCGCGCGACATGTGGCGAACGCTCGAGCAGGACGGCACGGCGTTCAAGGTCATCAACACACCGGTTCGCGACGAAGGCGGCGGCGCGCCTGGCCCGTCTTGGCCAGCGCCGGCGCTCGGTACGCATACGCTCGATGTCCTCAGGAGCGTGGGGATCGGCGAGGAAAGGCTGCATGCCCTGCTCACCGAGGGCATCATCGGTGCACCCGCGGGCGATGAATAG
PROTEIN sequence
Length: 406
MDREASSTATNKAYLVIELGHALVGPYAGAILSDLGARMIKVEPLQSDLMRLRGSANSIAYPFQMIHCGKYTTAIDIKDPQGSALVKKMTGEADIVVENFRPGVLKKYDLDGDSVLRRFPHIVYCSISGFGKTGPMAEEPGVDLVAQGQCGLMSVTGMPGEDPVKAGFPIADLGGGMWAVIGMLAALQRARATGKGTVIDVALTDSVLAWSVWEAADYQATGIVPGPLGSAHRLVAPYRAYECAGGHWINVAGLHTRWRELCLLLEAPNLLNDPRFASESARYDNRELLDATLAPRFLTRGREDWLGALRALGIPCGPINDLSQTMSDAQFIARDMWRTLEQDGTAFKVINTPVRDEGGGAPGPSWPAPALGTHTLDVLRSVGIGEERLHALLTEGIIGAPAGDE*