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SCNpilot_cont_300_bf_scaffold_208_curated_3

Organism: scnpilot_dereplicated_Sphingomonas_1

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 571..3174

Top 3 Functional Annotations

Value Algorithm Source
Hopanoid biosynthesis associated RND transporter like protein HpnN n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7I0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 861.0
  • Bit_score: 1188
  • Evalue 0.0
Hopanoid-associated RND transporter, hpnN {ECO:0000313|EMBL:GAO55501.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 837.0
  • Bit_score: 1227
  • Evalue 0.0
hopanoid biosynthesis associated RND transporter-like protein HpnN similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 861.0
  • Bit_score: 1005
  • Evalue 1.00e-290

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2604
ATGATGAACCCCGTCCCGCGCGCCGTCGCGGCGAGCATCGCCCGTCCGTGGCTGACGATCGTCGCCGCGCTGGTGCTGGCGGCGCTGGCGCTGGCGGTCGTCGCAGATCGCTTCGCGATGACCACCGACACGGCGGAGCTGATCTCCCCCAATGTCGATTGGCGCAAGCAAGAGCGGGCGATGGAGACCGCCTTCCCGCAGCTCCGCGACGTCATGCTGGTGATGATCGACGGCGCGACGCCCGAGCAGGCGGAGGATGGGGCGACCCGCCTCGCCACGCGGCTCGCGGCGGACAAGGCGCATTTCCGCCGCGTCTCGCGCCCGGACGGGGGCGACTTCTTCGGCCGTGAGGGGCTGCTGTTCGGGTCGGAGAAGGATGTCCGCGACGCCACCTCCGCGCTGATCGAGGCGCAGCCGATGCTTGGCCCCCTCGCCGCCGATCCCAGCCTGAGGGGCGTCGCCGGTGCGGTGGCGACGATGGCGGACGGGGTGGCGGCGGGACAGGTTTCCGCCGACCGGATCGACAAGCCGGTCCGCGCGCTCGCCGACGCGGTGGACGGCGCGTTGGCGGGCAAGCCCAGGCCCTTTTCGTGGCAGACGCTGTTCGGCGGACAAGGCGGCGCGCTGGCCGCGCCGACCCGGCGACTGATCCTCGTCCAGCCGGTGCTCGATCACGGCGCGCTGATGCCCGGCGAGACGGCCGAGGAGGCGGTGCGGCAGGCGGCCGGCGCGCTCGGGCTAGACGCCGCGCATGGCGTCCGCGTGCAGCTCACCGGCGAAGTGCCGCTCGCCGACGAGGAATTCGCCACCTTGCAGGAGAATATCGGCCTCGTCGGCGCGATCATGCTTGGGGCGATGCTGATAACGCTCTGGCTGGCGACGCGCTCGGCGCGGCTGGTCGCGGCGATCCTCGCCACCATCCTGCTCGGCCTCGTCATCACCATGGCGATCGGGCTGCTCGCGGTGGGGCGGTTCAACCTGATCTCGATCGCGTTCATCCCGCTGTTCGTCGGACTGGGCGTGGATTTCGGCATCCAGATCTGCGTCCGCTACAATGCCGAGCGCGCGAGCGGCGCGGCGCCCGATGCGGCGCTGCGCCAGGCCGCCGCCGTGCTCGGCGCGCCACTGACGCTGGCGGCGGGGGCGATCTTCCTCGGCTTCGGCGCGTTCCTGCCGACCGAATATATCGGCATCGCCGAGCTGGGCGTGATCGCCGGGCTGGGCATGGTTGTCGCGCTGGCGCTGAGCGTGACATTGCTGCCCGCGCTGGTGATCGTGTTCCGGCCGGGCGCGCCGCGCGGCGAGACGGGCTTTGCGCGGCTCGCGCCGATCGATCGTCTGCTGGAGCGACGGCGCGGCGCGGTGCTGTGGACGTTCGTGGCGGCGCTGGCCGCGAGCATCGCGCTGCTGCCGTGGGTGGTGTTCGATTTCAACCCGCTCCACCTGCGCGATCCCCATGCCCCCGCGATGCGCGCGCTGGCCGAGCTGACCCGCGATCCCGACCGCACGCCCAACACGATCGACGTGCTTGCCGCCAACCGCGCCGACGCAGCGACGCTGGCCGCGCGGCTCGCGAAGTTGCCGGAGGTGTCGCACGTCGTCTCGCTCGACAGCTTCGTGCCGGAGGATCAGCCGCCCAAGCTCGCGCTGATCCAGGATGCGGCGCTGCTGCTCGATGTGACGATCAACCCGCTCGACGTCGCGCCGCCGCCCGCCGATGCCGATCTCGTCGCGTCGCTGGGCCAAAGCGCGGTGAAGCTGCGCGCCGCGGCGAAGGGCGATGCGGCGGGGCAAGACATGCTGCGCCTCGCCGATGCGTTCGACCGGCTGGCGCGCGCGTCCGCCGCGAAACGCGCCGCGGTCAACGCGCTGCTCGTCCGCCCGCTCGGCGTGATGCTCGATCAGATGCGCCTCGCGCTTCAGGCGTCCCCTGTCACCCGCGCCGACCTGCCGCCCGATCTGGTGCGGGACTGGGCCGCGCCGGACGGGCGGATGCGGTTGCAGGTCTTTCCCGCCGGTAACAGCAACGACAACACGGTAATCCGCCGCTTCCGCGCGGCGGTGGCGGGCGTGACCCCGGCGATCTCCGGCCTGCCGGTCGCGACCCAGGCGGCGGCGGGCACGGTGGCGGGCGCGTTCGTCAAGGCCGGGATCATCGCCTTCCTGCTGGTCAGCGCCCTGCTGTTCGCGGTGCTGCGCGATCTGCGCGAGGTGGCCTTCACGCTCGCGCCGGTGGTGCTGTCGATCTTCCTCACGCTCGGAAGCTGCGTGCTGATCGGCCAGCCGATCAACTTCGCCAACATCATCGCCTTCCCGCTGCTGTTCGGGGTGGGCGTCGCCTTCCATATCTATTTCGTGATGGCGTGGCGGGCGGGAGCGACCGGGCTGCTGCAATCGAGCCTAGCGCGCGCCGTGCTGTTCAGCGCGCTTGCGACCGGCACGGCGTTCGGCAGCCTGTGGCTGTCGCGCCATCCGGGCACCGCCAGCATGGGTGAGATATTGATGATCTCCTTGGTCTGGACGCTGATCTGCGCCTTGATCTTCGAGCCGGCGCTGCTCGGCCCGCCCGAGCGGAAGCGGCACAATGAACCCGCACCACGCTGA
PROTEIN sequence
Length: 868
MMNPVPRAVAASIARPWLTIVAALVLAALALAVVADRFAMTTDTAELISPNVDWRKQERAMETAFPQLRDVMLVMIDGATPEQAEDGATRLATRLAADKAHFRRVSRPDGGDFFGREGLLFGSEKDVRDATSALIEAQPMLGPLAADPSLRGVAGAVATMADGVAAGQVSADRIDKPVRALADAVDGALAGKPRPFSWQTLFGGQGGALAAPTRRLILVQPVLDHGALMPGETAEEAVRQAAGALGLDAAHGVRVQLTGEVPLADEEFATLQENIGLVGAIMLGAMLITLWLATRSARLVAAILATILLGLVITMAIGLLAVGRFNLISIAFIPLFVGLGVDFGIQICVRYNAERASGAAPDAALRQAAAVLGAPLTLAAGAIFLGFGAFLPTEYIGIAELGVIAGLGMVVALALSVTLLPALVIVFRPGAPRGETGFARLAPIDRLLERRRGAVLWTFVAALAASIALLPWVVFDFNPLHLRDPHAPAMRALAELTRDPDRTPNTIDVLAANRADAATLAARLAKLPEVSHVVSLDSFVPEDQPPKLALIQDAALLLDVTINPLDVAPPPADADLVASLGQSAVKLRAAAKGDAAGQDMLRLADAFDRLARASAAKRAAVNALLVRPLGVMLDQMRLALQASPVTRADLPPDLVRDWAAPDGRMRLQVFPAGNSNDNTVIRRFRAAVAGVTPAISGLPVATQAAAGTVAGAFVKAGIIAFLLVSALLFAVLRDLREVAFTLAPVVLSIFLTLGSCVLIGQPINFANIIAFPLLFGVGVAFHIYFVMAWRAGATGLLQSSLARAVLFSALATGTAFGSLWLSRHPGTASMGEILMISLVWTLICALIFEPALLGPPERKRHNEPAPR*