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SCNpilot_cont_300_bf_scaffold_179_curated_5

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(3825..4016)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000373D24D similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 63.0
  • Bit_score: 131
  • Evalue 4.00e-28
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 63.0
  • Bit_score: 126
  • Evalue 4.00e-27
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADB36731.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 63.0
  • Bit_score: 126
  • Evalue 1.80e-26

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 192
ATGCAAACAGGAACTGTAAAATTCTTTAATGAAACCAAAGGGTTTGGTTTCATTAAACCCGATGAAGGTGGCGAAGATATTTTTGTACACGCTACTGGCCTCATCGACCAAATCCGCGAAAACGACAAAGTGAAATTTAATGTCGAGCGTGGACGGAAAGGCTTAAACGCCGTTAATGTCGAAATAGCTTAA
PROTEIN sequence
Length: 64
MQTGTVKFFNETKGFGFIKPDEGGEDIFVHATGLIDQIRENDKVKFNVERGRKGLNAVNVEIA*