ggKbase home page

SCNpilot_cont_300_bf_scaffold_179_curated_25

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(29972..30745)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:CCH54402.1}; EC=4.1.3.39 {ECO:0000313|EMBL:CCH54402.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 257.0
  • Bit_score: 463
  • Evalue 2.50e-127
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 257.0
  • Bit_score: 462
  • Evalue 7.30e-128
2-dehydro-3-deoxyglucarate aldolase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D49F8 similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 257.0
  • Bit_score: 497
  • Evalue 8.50e-138

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 774
ATGAAAGATTTGAAGAAACGACTTCGCCAGGGAGAAACACTGAACGGATGTTGGTTGAATCTGGGTAGTTCTCTGACTGCGGAGATAGTCGGACAGGCAGGCTTCGACTGGGTACTGATCGATCTGGAACACGGCGCTGGCTCTGAAAAAGATGTACTTTATCAGCTTCAGGCACTTGAGCATACATCGGCAGGAGCTATTGTACGTGTCGAAAGCGCCGAAAGTCAACGTATTCATCGGGTGCTGGACATGGGGGCCGAAGGGATTATGTGTCCCAAAATAGGCAATCCAGACGATGCCCGAAAAGTTGTAAGCGGCTTGCACTATCCACCTTTCGGGAGCCGGGGAGTAGCCAAAATGGTTCGGGCGACGGGATTCGCACAACAATTTGACCAGTACTACCAGCAGGCGCGGGAAACCATTCTGGGCGTCGTTCAGATCGAAACCGTTGAAGTACTGAATCACCTTGACGAAGTAGCTGCTATCGACGGTGTCGATGTATTGTTTATTGGCCCGGCTGATCTGTCGATGGAGTTAGGTATCTTCGGTCAGTTCAATCATCCTCGTTTTACGGAAGCTGTCAAAGCTACGGTCGATGCCGCCCAAAAAGCGGGTAAAGCCACCGGTATTCTCTTCTTTAATCCCGACGACTACCAACGCTATCATGACTTAGGTATCCGACTGATTGCTTGCGGAGCCGATGCTACGTTTGTGGCCGATGGTGCCCGGAATCTGGCTAAAAAGCTGGATTCGTTTCGGTCGATTTACAAATAG
PROTEIN sequence
Length: 258
MKDLKKRLRQGETLNGCWLNLGSSLTAEIVGQAGFDWVLIDLEHGAGSEKDVLYQLQALEHTSAGAIVRVESAESQRIHRVLDMGAEGIMCPKIGNPDDARKVVSGLHYPPFGSRGVAKMVRATGFAQQFDQYYQQARETILGVVQIETVEVLNHLDEVAAIDGVDVLFIGPADLSMELGIFGQFNHPRFTEAVKATVDAAQKAGKATGILFFNPDDYQRYHDLGIRLIACGADATFVADGARNLAKKLDSFRSIYK*