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SCNpilot_cont_300_bf_scaffold_101_curated_62

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(50687..51316)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Spirosoma panaciterrae RepID=UPI000378F47C similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 209.0
  • Bit_score: 398
  • Evalue 4.40e-108
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 209.0
  • Bit_score: 381
  • Evalue 1.30e-103
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 209.0
  • Bit_score: 381
  • Evalue 6.00e-103

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 630
ATGGAAGTAATCGTATATAACAGCAAGGGCGAAGACACAGGCAAAAAGGTCACCCTTTCGGAAGAGATCTTCGGTATTGAGCCGAACCAACACGCGATTTACCTCGACGTGAAACAGTACCTGGCCAACCAGCGTCAGGGAACCCACAAAGCAAAAGAACGTGCTGAAGTTGCCCGTTCAACCCGTAAGCTGAAGAAACAAAAAGGTACAGGCGGAGCCCGTGCAGGTAGCGCCAAATCACCTGTTTTCGTGGGTGGTGGTACCGTTTTCGGTCCACGTCCCCGTGACTATAGCTTTAAGCTGAACAAAAAAGTAAAATCGCTGGCTCGCCAGTCGGCTTATGCCGTTAAAGCTCGGGCGAACAGCATTTCAGTGATTGACAGCATCTCTCTGGAGGCTCCCCGCACCAAAGATTACATTCAGTTCCTGAATGATCTGAACGTATCTGGCCGCAAAACGCTCCTGATTCTGCCAGACGTAAATACGAATGTAGTTTTGTCGAGCCGGAATGTTCAAAAGGCGAAAGTAACGACCGCTGCACAGGTAAATACGTACGATCTGATGAATGCCGATCAACTGCTCATCAGTGAAGAAGCGCTGTCAACCATCCAAACCTTGTTTGAGAAATAA
PROTEIN sequence
Length: 210
MEVIVYNSKGEDTGKKVTLSEEIFGIEPNQHAIYLDVKQYLANQRQGTHKAKERAEVARSTRKLKKQKGTGGARAGSAKSPVFVGGGTVFGPRPRDYSFKLNKKVKSLARQSAYAVKARANSISVIDSISLEAPRTKDYIQFLNDLNVSGRKTLLILPDVNTNVVLSSRNVQKAKVTTAAQVNTYDLMNADQLLISEEALSTIQTLFEK*