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SCNpilot_cont_300_bf_scaffold_101_curated_205

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(201794..203578)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FEAC9 similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 594.0
  • Bit_score: 1173
  • Evalue 0.0
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 595.0
  • Bit_score: 1129
  • Evalue 0.0
30S ribosomal protein S1 {ECO:0000313|EMBL:AKD57805.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 595.0
  • Bit_score: 1129
  • Evalue 0.0

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1785
ATGAGCAAAACGCAGCAACGCGAACTGCCGGCATTTGATTGGGACCGCGCAGACAACAAAGGGTTTGGGAGTGGCTATTCGGATGCCGAGCGCAACCGGATGATGGAACTGTACGACAATACCCTGTCGGAAGTTAAAGAAAAAGAAGTAGTAATGGGAACCGTCGTTGGGATAACGGACCGGGAAGTATTACTCAACATTGGATTTAAGTCGGATGGCTTGGTGCCTGCTTCAGAATTCCGGGATATGCCCGACCTGAAGATGGGTGATGAAATTGAAGTTTACGTAGAAAATCAGGAAGACCCGAATGGCCAGCTGGTACTCTCGCGCAAGAAAGCGAAAGTGATTACCGCATGGCAGAAAATTCAGCGTGCGCTCGACGAAGACCTCGTAATCGATGGTTTCGTAAAACGCCGGACCAAAGGTGGTCTGATTGTCGATATTTATAGTGTAGAAGCGTTCTTGCCAGGTTCGCAAATCGACGTGAAGCCGATTCGTGACTTCGACATCTTCGTTGGCAAGAAAATGGAGGTTAAAGTCGTCAAGATCAACTATGCAAACGATAACGTAGTCGTTTCGCACAAAGTCCTGATCGAGAAAGACCTCGAAGCACAACGTGCTCAAATCCTGAACAACCTCGAAAAAGGTCAGGTACTCGAAGGCGTTATCAAGAACATGACCAACTTCGGTGTGTTCATCGATCTTGGTGGCGTCGATGGTCTGCTGCACATCACGGATATTTCGTGGGGCCGCATCAGCCACCCATCAGAAGTACTGCACCTCGACCAGAAAGTCAACGTGGTGGTTCTGGACTTCGACGAAGACAAAAAGCGTATCTCGTTGGGCATGAAGCAGCTTCAGGCTCATCCATGGGATGCTCTGGCCGAAGATATTCAGGTTGGCTCGAAAGTGAAAGGCAAAATCGTGAATGTAGCCGATTACGGTGCATTCCTCGAAATCATGCCAGGTGTAGAAGGTCTGATCCACGTTTCGGAAATGTCATGGTCGCAGCACCTGCGTAACCCACAGGAGTTCCTGAAAGTGGGTGACGAAGTAGAGGCTGTTGTGCTGACGCTCGACCGTGCCGATCGGAAAATGTCGTTAGGCATTAAGCAACTGACCGAAGATCCATGGACTCGCCCTGAACTGCGTACGAAATACGCGGTTGGTACAAAGCACAAAGGCGTGGTCCGTAACCTAACTAATTTCGGTTTGTTCCTTGAACTGGAAGAAGGCATCGATGGTCTGGTACACGTATCCGACCTGTCGTGGACGAAGAAGATCAAGCATCCTTCGGACTTCATCAAGGTTGGTGACGAACTCGAAGTAGTGGTTCTGGAACTGGACGTCGACAATCGTCGTCTGGCCCTGGGTCACAAGCAACTTGAAGAGAACCCATGGGATACGTTCGAAACCGTATTTGCAGTAGGTACGATTCACCGTTGTACCATCCTGAGCAAAAACGATAAGATGGCCACTCTTGAGCTGCCATACGGTATCGAAGGGTTCTCGTCGCTGAAAAATCTGGCGAAAGAAGATGGAACGTTTGCCGAAGTAGGCGAAACGCTCGATTTCAAAGTAACCGAATTCTCGAAAGAAGAGAAGCGTATCATGCTGTCGCACACGAAAGCATGGCAGGAGAAGAACGAGCCTGTGAAAGAGCCAAAAGCACCAAAAGCTTCTGCTTCGAAAACCGGTTCAACATCAGCTCCTGAGCGTGGTGCTACCCTGGGCGACCTTGATGCACTGGCTGCGCTGAAAGAACAAATGGAAGGCCGTAACTAA
PROTEIN sequence
Length: 595
MSKTQQRELPAFDWDRADNKGFGSGYSDAERNRMMELYDNTLSEVKEKEVVMGTVVGITDREVLLNIGFKSDGLVPASEFRDMPDLKMGDEIEVYVENQEDPNGQLVLSRKKAKVITAWQKIQRALDEDLVIDGFVKRRTKGGLIVDIYSVEAFLPGSQIDVKPIRDFDIFVGKKMEVKVVKINYANDNVVVSHKVLIEKDLEAQRAQILNNLEKGQVLEGVIKNMTNFGVFIDLGGVDGLLHITDISWGRISHPSEVLHLDQKVNVVVLDFDEDKKRISLGMKQLQAHPWDALAEDIQVGSKVKGKIVNVADYGAFLEIMPGVEGLIHVSEMSWSQHLRNPQEFLKVGDEVEAVVLTLDRADRKMSLGIKQLTEDPWTRPELRTKYAVGTKHKGVVRNLTNFGLFLELEEGIDGLVHVSDLSWTKKIKHPSDFIKVGDELEVVVLELDVDNRRLALGHKQLEENPWDTFETVFAVGTIHRCTILSKNDKMATLELPYGIEGFSSLKNLAKEDGTFAEVGETLDFKVTEFSKEEKRIMLSHTKAWQEKNEPVKEPKAPKASASKTGSTSAPERGATLGDLDALAALKEQMEGRN*