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SCNpilot_cont_300_bf_scaffold_49893_curated_2

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(699..914)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S620_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 140
  • Evalue 5.70e-31
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 140
  • Evalue 1.80e-31
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADY52123.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 140
  • Evalue 7.90e-31

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 216
ATGAAAATATCAGGCAGACATATTGGAGAAATGCTGAAAGAAGCCAGAGAACAAAGACAGCTAACTCAAGAACAATTAGCCCAAAAAGTGGGTAAGAAAAGGAGTTACATTTCTAAGGTCGAAACTGATTATGGCAATAATATCAAACTTCAAACCCTTAAAGAGATAGTAGAAAAGGGATTTGACGGTACGGTTAAAATTAATTTGGAACTCTGA
PROTEIN sequence
Length: 72
MKISGRHIGEMLKEAREQRQLTQEQLAQKVGKKRSYISKVETDYGNNIKLQTLKEIVEKGFDGTVKINLEL*