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SCNpilot_cont_300_bf_scaffold_746_curated_14

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(17592..18143)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QLD5_SPILD similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 183.0
  • Bit_score: 342
  • Evalue 2.50e-91
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 183.0
  • Bit_score: 342
  • Evalue 7.90e-92
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB39082.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 183.0
  • Bit_score: 342
  • Evalue 3.50e-91

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 552
GTGAAACGCCAGTCCTCTTTAGTGTCAGAAAGCGTCCTGATCGAGAAACTCACTCAACGCGATCAGCAGGCTTTTCAGTGGCTTTACGATCAGTACTCTCCCGCGCTATATGGCGTCGTATTGCGCATTGTCCGCGACGACGAACAAGCGGCTGATCTTCTTCAGGACATCTTCGTTAAAATCTGGAAAAACCTGGATGCGTACGATGCCAGCAAAGGGCGTTTGTTTACCTGGATGCTGAACATTGCCCGCAACAGCGCTATCGATTCCCTGCGAGCACGCAAAACCCAGCCTTCGGCAGCAATCCGAACGGATGAAGAGAACGTACATATAGTTGACAGGCAGTATAATACCGAACAGCCTAACCCAGAATTTATAGGTATTCAGGAGGTTGTCAGCCAATTGCGCCCCGAGCGCAAGCAGCTGATCGACCTGGTTTATTTTTCGGGCTATACGCATGAAGAAGCTGCTGAAAAACTGAACCTGCCTTTAGGAACTGTAAAAACGCGAATACGTGCGGCCTTACAGGAGCTGAAACAACTATTTAAATAA
PROTEIN sequence
Length: 184
VKRQSSLVSESVLIEKLTQRDQQAFQWLYDQYSPALYGVVLRIVRDDEQAADLLQDIFVKIWKNLDAYDASKGRLFTWMLNIARNSAIDSLRARKTQPSAAIRTDEENVHIVDRQYNTEQPNPEFIGIQEVVSQLRPERKQLIDLVYFSGYTHEEAAEKLNLPLGTVKTRIRAALQELKQLFK*