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SCNpilot_cont_300_bf_scaffold_558_curated_7

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(6242..6796)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035DCBBC similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 184.0
  • Bit_score: 278
  • Evalue 5.80e-72
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 183.0
  • Bit_score: 226
  • Evalue 6.30e-57
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AFK04689.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 183.0
  • Bit_score: 226
  • Evalue 2.80e-56

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Taxonomy

Emticicia oligotrophica → Emticicia → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
ATGGCCTGTCGGGCTGGTGATAACCGGGCGCAGCGGACCCTGATTAGCCAGTTTTTAAGCTTTGCCAAACGAGTCTGTCAGCGCTATACGGCCAACCCACACGAAACGGAAGAAATAATTAACGAAGGGTTTCTAAAGGTATTTACGCACCTGGAACGGTATGATTCAACGCAGCCCTTTCAAGCCTGGCTACGAACTATCTTAGTCAATACGGCGGTTGATTATTACCGGAAACGGCAAAAGTGGACAAACCAACTTGGTTTGGATGAATTGGAAGTCATTGATTGGAACGACGATGTGATTGCGGCTATTTCGGGGGAAGAGATTCTGGCGATGGTGCAACAGTTGCCACCCGCCTACCGTATGGTTTTCACCCTGTTTGTGGTAGAAGGTTACTCTCATCGTGAAATTGCGGATCTGCTTGGTATTCAAGAGGGAACCTCTAAATCGAACCTGCGTGATGCCCGTCGTAAATTGCAACACATGGTAAAACTATACTATCCGGCCTTGTATCAGCAGTATACCTGGCCCAAAAACCGATTCAATGAAAACTGA
PROTEIN sequence
Length: 185
MACRAGDNRAQRTLISQFLSFAKRVCQRYTANPHETEEIINEGFLKVFTHLERYDSTQPFQAWLRTILVNTAVDYYRKRQKWTNQLGLDELEVIDWNDDVIAAISGEEILAMVQQLPPAYRMVFTLFVVEGYSHREIADLLGIQEGTSKSNLRDARRKLQHMVKLYYPALYQQYTWPKNRFNEN*