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SCNpilot_cont_300_bf_scaffold_129_curated_29

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 35050..35379

Top 3 Functional Annotations

Value Algorithm Source
large mechanosensitive ion channel protein MscL n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E09CC similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 109.0
  • Bit_score: 207
  • Evalue 9.80e-51
Mechanosensitive ion channel protein MscL {ECO:0000313|EMBL:AKD57225.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 109.0
  • Bit_score: 194
  • Evalue 7.10e-47
large conductance mechanosensitive channel protein similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 109.0
  • Bit_score: 180
  • Evalue 2.40e-43

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 330
ATGCTAAGTGAATTTAGAACCTTTATTGCTCAGGGCAACGTCATCGATCTGGCCGTTGGTGTTATCATCGGTGCTGCATTTGGTAAAATTACTACCTCACTAGTTGAAGACATTATAAACCCAATTCTGGGGATTGTTTTAGGCGGAGTTGATTTCAGCCAAATGAAATACGTTCTTAAAGAAGCCGTTGGCACTACACCTGAAGTGGCCATTCGATATGGTAACTTCCTGAATACGATCATCCAGTTTTTGATTATCGCCTGGGTAGTTTTCCTGATTGTCAAGTTGGCTAATCGTGCACGGCTATCCAATTCGATGCAATCTAAATAA
PROTEIN sequence
Length: 110
MLSEFRTFIAQGNVIDLAVGVIIGAAFGKITTSLVEDIINPILGIVLGGVDFSQMKYVLKEAVGTTPEVAIRYGNFLNTIIQFLIIAWVVFLIVKLANRARLSNSMQSK*