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SCNpilot_cont_300_bf_scaffold_124_curated_10

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 11084..11284

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003623674 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 135
  • Evalue 2.20e-29
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 64.0
  • Bit_score: 124
  • Evalue 1.60e-26
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADB42347.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 64.0
  • Bit_score: 124
  • Evalue 7.20e-26

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 201
ATGCAAACAGGTGAAGTAAAATTCTTTAACGAGAGTAAAGGCTACGGATTTATCGTTGAAGACGGTACCAACAGAGACATTTTCGTTCACATTACTGGTTTAAACGGAATTACCATCCGTGAGAAAGACCGGGTACAGTTTGAAGTGATTGACGGCAAAAAAGGACTAAACGCCGTAAAGGTGCAGAAAATAGCCGACTAG
PROTEIN sequence
Length: 67
MQTGEVKFFNESKGYGFIVEDGTNRDIFVHITGLNGITIREKDRVQFEVIDGKKGLNAVKVQKIAD*