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SCNpilot_cont_300_bf_scaffold_124_curated_59

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 65382..65954

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Spirosoma panaciterrae RepID=UPI000360A80E similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 190.0
  • Bit_score: 386
  • Evalue 2.10e-104
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 190.0
  • Bit_score: 364
  • Evalue 6.90e-98
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 190.0
  • Bit_score: 363
  • Evalue 3.40e-98

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
ATGACTGACGAAGAACTCCTCGCCAAATTTCGCGATCCGTCGAGCCGAAATTATGCCTTTAATCTGCTGGTGCGCAAGTATCAGCAGAAAATCTATTGGCATATCCGGAAGATGGTTATTGATCACGATGATGCCGATGACCTGGTGCAGGAAACGTTCATAAAAGTCTGGAATAGCCTGGAACAGTTTCGGGGTGATAGTCAGTTATATACCTGGATTTATCGGATTGCTACCAACGAGTGTCTTAACTATCTGAATAAGAAACGTCGCCGATTCTTTTTGCCGATTGGGGATGTAGAAGGGGAGTTGATGGAAAAACTGGAAACCAATGCCGCCTACGTAACGTCGGGCAACGATCCCAGTGGCGAAGACGTACAGTTGAAGTTACAGAAAGCGTTGCTGAAACTACCCGACAAACAGCGTTTGGTTTTCAATATGAAGTATTTCGACGATATGAAATATGAAGATATTTCCGAAATTACAGGAACATCTGTTGGGGCTTTAAAGGCATCGTACCACCTTGCCGTTAAGAAGATTGAAGATTTTTTTAATAACTCGGATACAGACGATTAA
PROTEIN sequence
Length: 191
MTDEELLAKFRDPSSRNYAFNLLVRKYQQKIYWHIRKMVIDHDDADDLVQETFIKVWNSLEQFRGDSQLYTWIYRIATNECLNYLNKKRRRFFLPIGDVEGELMEKLETNAAYVTSGNDPSGEDVQLKLQKALLKLPDKQRLVFNMKYFDDMKYEDISEITGTSVGALKASYHLAVKKIEDFFNNSDTDD*