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SCNpilot_cont_300_bf_scaffold_184_curated_2

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(2265..2999)

Top 3 Functional Annotations

Value Algorithm Source
Putative response regulatory protein ypdB n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 234.0
  • Bit_score: 373
  • Evalue 1.40e-100
Putative response regulatory protein ypdB {ECO:0000313|EMBL:CCH54217.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 234.0
  • Bit_score: 373
  • Evalue 1.90e-100
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 228.0
  • Bit_score: 271
  • Evalue 2.30e-70

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 735
ATGCCTTCGACTACCTATTCCTGCCTGATTGTTGATGACAGCGAGATTGATCGGTTGACGGCGCTGGCTCACGCACGACAATACCCGATGCTCGAGGTAATAGGGATGTTTGAATCGGCTACTGATGCCTTGCCGTTTTTACAGGAGCATCCCGTAGAGGTTTTGCTGCTCGATGTAGATATGCCTGGCCTGAATGGGATTGAGCTTCGGGCCAGGCTGATGCAGATTCCGGTATGCGTGTTCATTACGGCCTATCCCGATTACGCTGCCGAAAGCTTTGCCGTCGATGCGTTCGATTATCTGGTAAAGCCCATCCGGGCTGAACGATTCAGGCACACCATGGACCGCATCGGGCATTTTTTTGAATTGAACCGAAAAGCGCAATTGTTCGATCTGAGCCTGGGAGCTGATACCGTGTTCATCAAAGACGGCCATCGGCAAGTTAAATTGAAGCTGCATGAGATTGTATACCTGGAAGGGCTGAAAGATTATACCCGGATCGTAACACCCACCCAGCAATACACAGTACTGTCATCCATCGGGACCTTGCTACAGAACAGCTCATTTGGATCGTTTCTCCGTATTCACCGTAGTTACGCTGTTCAGCGACACTTTATCGACCGAATCGAACCCCAGCAGATTCAGGTTCAGCAGTTTACTTTGCCAATTGGCCGTAGCTACCGGTCGACGCTGGACGAACTGATTGCCCGTCAGCAAACCAGCCGATTTGCCTGA
PROTEIN sequence
Length: 245
MPSTTYSCLIVDDSEIDRLTALAHARQYPMLEVIGMFESATDALPFLQEHPVEVLLLDVDMPGLNGIELRARLMQIPVCVFITAYPDYAAESFAVDAFDYLVKPIRAERFRHTMDRIGHFFELNRKAQLFDLSLGADTVFIKDGHRQVKLKLHEIVYLEGLKDYTRIVTPTQQYTVLSSIGTLLQNSSFGSFLRIHRSYAVQRHFIDRIEPQQIQVQQFTLPIGRSYRSTLDELIARQQTSRFA*