ggKbase home page

SCNpilot_cont_300_bf_scaffold_98_curated_7

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(7003..7269)

Top 3 Functional Annotations

Value Algorithm Source
nitrogen-fixing protein NifU n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C6DD9 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 88.0
  • Bit_score: 167
  • Evalue 5.30e-39
nitrogen-fixing NifU domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 88.0
  • Bit_score: 165
  • Evalue 8.30e-39
Nitrogen-fixing NifU domain protein {ECO:0000313|EMBL:ADB37160.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 88.0
  • Bit_score: 165
  • Evalue 3.70e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 267
ATGGAAACGGTAGTTACCAACGACGAACTGATTACGAAAATAGAACGCGCTCTGGATAGCATGCGCCCTTATCTGGCTGCCGATGGAGGTAACGTGAAAGTACTGGAAGTTACTGAGGATAAAACCGTTCGGCTCGAACTGGTTGGTTCATGCGGTTCATGTCCTATGTCGGCTATGACTTTCAAGGGAGGTTTAGAGGAAGCTATCTTACGGGCTGTACCTGAAATTAATAAAGTCGAAGCTGTTAATATTACCCCAGCTTTTTAA
PROTEIN sequence
Length: 89
METVVTNDELITKIERALDSMRPYLAADGGNVKVLEVTEDKTVRLELVGSCGSCPMSAMTFKGGLEEAILRAVPEINKVEAVNITPAF*