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SCNpilot_cont_300_bf_scaffold_360_curated_15

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 17967..19226

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Spirosoma panaciterrae RepID=UPI0003814BD5 similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 419.0
  • Bit_score: 753
  • Evalue 8.20e-215
ABC transporter permease {ECO:0000313|EMBL:AKD55725.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 419.0
  • Bit_score: 691
  • Evalue 5.40e-196
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 419.0
  • Bit_score: 680
  • Evalue 3.60e-193

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1260
ATGGACAGAGAACTAGCCCCGGAAGTAGTGACCCGAAGTCGCAACAAAAACCTGCTGGTGGGCGTGGTAGTGGTGGTGGGGCTGGCCGTAGCCCTGACCTGGGCGCGCGATGCACTGAAAACCTCCGTCGAAGCAGAGAAAATACGGTTAGCGACGGCCGAGATCGGACCCGTTGAGAATACGCTCGATGCAACGGGGGAAGTGATTCCGGCTTTCGAACAGGTGATTACCAGCCCCATCCGGGCCAGCATCCGGCGGGTACTGCTCACACCCGGAACATCCGTAAAACCCGGCCAGCCCATCCTCGATCTTGATAAATCGCTGACGGAAATTGAACTGGAGAAAATAAAGGATCAACTCGAACTCAAACGAAACGGTATCGACCAGTTACGGATGAAGCTTACGAAAAGCCTGTACGATGCCGAAGTAAATGACCAGATCAAGCAACTCAATATCAGCAAACTAAGAGCCGAACTCGAAGGCATCCGCCGTTTGCAGAAAGTAGGCGGGAACACGGCCGAAGATGTCACCCGCTCCGAAAATGCCCTGCGCGTGGCTGAACTGGAAAAGAAGCAACTGGAGAATGATCTGAATTACAACCGGCAGTCGATGGGGGCGAGCCTGCGCGAAACAACCTTACAGGCGCAGATCGAAGAAAAAAATGTCAAAGAGTTACAGCATAAACTAAAGCAGGCCGACATCGTTGCCGATCGGCCGGGGGTGCTGACCTGGGTCAACGAAAATATTGGTTCGGCTGTCAACGAAGGAGAAATGCTGGCGAAACTGGCCGATCTGGCCAGCTTTCGGGTCGAAGGGTCCTGCTCAGATGTGTACGCCGATCAGGTGAAAGTGGGGCTGCCCGTTATTGTGAAAGTAAACGAGACATCGCTTCGGGGGCAGATCACACAGGTAAAACCCGCTGTCAAGAACGGCATAGTTCAGTTTGTGATTCAGTTGGACGATAACCGTCATACCTCGTTGCGGCCCAACATGAAGGCCGATGTGTTTATAGTAACCAACCGTACCGCCAATGCCGTTCGGGTGGCGAATGGACCCGCGTTTAAGGGAAAGCGGAAACAGTTTGTCTATGTATTGCCGAAAGGGGAGAAGGTGGCTCATCGACGGGAAGTGACCATCGGCCTCTCCAACTTCAATTTCGTGGAGATTAAGCAGGGACTTCAGCCGGGAGAACAGATCATTCTGACGGACCTGAGCGAGTACGAGCATCTGGAAGACATTACGATTACCCCGAAACGTTAG
PROTEIN sequence
Length: 420
MDRELAPEVVTRSRNKNLLVGVVVVVGLAVALTWARDALKTSVEAEKIRLATAEIGPVENTLDATGEVIPAFEQVITSPIRASIRRVLLTPGTSVKPGQPILDLDKSLTEIELEKIKDQLELKRNGIDQLRMKLTKSLYDAEVNDQIKQLNISKLRAELEGIRRLQKVGGNTAEDVTRSENALRVAELEKKQLENDLNYNRQSMGASLRETTLQAQIEEKNVKELQHKLKQADIVADRPGVLTWVNENIGSAVNEGEMLAKLADLASFRVEGSCSDVYADQVKVGLPVIVKVNETSLRGQITQVKPAVKNGIVQFVIQLDDNRHTSLRPNMKADVFIVTNRTANAVRVANGPAFKGKRKQFVYVLPKGEKVAHRREVTIGLSNFNFVEIKQGLQPGEQIILTDLSEYEHLEDITITPKR*