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SCNpilot_cont_300_bf_scaffold_360_curated_20

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 24139..25539

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Spirosoma panaciterrae RepID=UPI00036BDC3F similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 467.0
  • Bit_score: 838
  • Evalue 3.70e-240
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 458.0
  • Bit_score: 807
  • Evalue 2.90e-231
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADB38368.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 458.0
  • Bit_score: 807
  • Evalue 1.30e-230

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1401
ATGTCGTCTCTACAGATTTTTACCATCATGCTTCTCATCATCGACGACGATATTGCTATTCAAACGTCTCTTTCGCTCCTATTTCGGAAAGAAGGCTTTCCAGTTAGGCTGGCCGATGGGCCGTTCGAGACGTTTGAGGTCCTGGATCAGGAAACCCCCGAAGCCATTCTGCTGGACATGAATTTCTCCGTCGATACATCGGGCGATGACGGACTGCGGTTGCTGCGCCGGATTCGGGAGCGGTTGCCTAATGTGCCGGTGATCCTGATAACGGGCTGGGGGAGTATCGATCTGGCTGTAGAAGGCATGAAGGCAGGGGCTAAAGACTTTATAACGAAGCCCTGGCAAAACGACCACCTTGTACAATCGGTGCGGACGGCATTGAATCTGGCCCAGGCGGCTCCAGCTTCACCCAACCGACGTAAACTCGACCAACAGTTTCAGTTTGAGAATATCGTTGGGGAAGATCCTAACCTGCTGGACATTCTGACTACTATCGGACGGGTGGCGCCAACCGATGCGCCCGTTTTGATTACGGGAGAAAGTGGAACAGGTAAAGAACTGATTGCCGAAGCTATTCACCAGAATAGCCGACGGAAGCGGCAGGCATTTGTAAAAGTCAACCTGGGCGGTATTTCATCGACGCTTTTTGAGAGTGAACTCTTTGGGCATGTACGGGGTGCATTTACCGATGCAAAAACGGATCGCGTCGGTCGGTTTGAACTGGCCAATAAAGGGTCGATTTTTCTGGACGAAATTGGCGATCTCGATCCGGCTAGTCAGGTGAAATTGCTGCGGGTATTACAGGACCGGACGTTTGAGCCGCTGGGGAGTAGTAAATCCCGAACGGTCGATGTACGGGTTATCTGCGCCACCAACCGGAATCTGGAAGAGATGGTCAGTAAAGGCCAGTTTCGCGAAGATTTGTTTTACCGTATTAACCTGATTACCGTTCGTTTGCCTGCCCTGCGAGAGCGCCCCGGCGACATTCCGTTGCTGGTTAACTACTTTGTCAGTAACCTTAAAACCATTTACAACCGACCCGATTTACGGGTAAGCGCTACTGCCCAGAAGTGGCTCAAAAATCTGCCATTGCCGGGCAATATTCGTCAGCTTAAAAATGTGGTGGAGCGCACCGTTCTGCTCTCACCCAACGATGAGTTACAAACCGACGATTTCGAGCGCAACCTTCCCCAAATGACCAGTACCCCGCACCTGGCACCCCATTCCCTGCCCGATGTTGGCACGATGACCCTGGAAGAAATGGAATACCAGATGATTCAGCGGGCAATGGCTTTTCACCAGAACCGGGTAGCGAAAGTAGCGCGCGCATTGGGCATCACCCGTTTTGCACTCTACCGCCGATTAGAGAAATTTGGTATTCCGTACGCTGAAGATTAG
PROTEIN sequence
Length: 467
MSSLQIFTIMLLIIDDDIAIQTSLSLLFRKEGFPVRLADGPFETFEVLDQETPEAILLDMNFSVDTSGDDGLRLLRRIRERLPNVPVILITGWGSIDLAVEGMKAGAKDFITKPWQNDHLVQSVRTALNLAQAAPASPNRRKLDQQFQFENIVGEDPNLLDILTTIGRVAPTDAPVLITGESGTGKELIAEAIHQNSRRKRQAFVKVNLGGISSTLFESELFGHVRGAFTDAKTDRVGRFELANKGSIFLDEIGDLDPASQVKLLRVLQDRTFEPLGSSKSRTVDVRVICATNRNLEEMVSKGQFREDLFYRINLITVRLPALRERPGDIPLLVNYFVSNLKTIYNRPDLRVSATAQKWLKNLPLPGNIRQLKNVVERTVLLSPNDELQTDDFERNLPQMTSTPHLAPHSLPDVGTMTLEEMEYQMIQRAMAFHQNRVAKVARALGITRFALYRRLEKFGIPYAED*