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SCNpilot_cont_300_bf_scaffold_352_curated_16

Organism: scnpilot_dereplicated_Stenotrophomonas_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 19816..20793

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 322.0
  • Bit_score: 435
  • Evalue 5.40e-119
rlmF; ribosomal RNA large subunit methyltransferase F (EC:2.1.1.181) similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 325.0
  • Bit_score: 386
  • Evalue 8.40e-105
Ribosomal RNA large subunit methyltransferase F n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZT35_PSEAC similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 335.0
  • Bit_score: 405
  • Evalue 4.30e-110

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Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGCCGACGCCCCCGCACCCGGCAACGCGGCGCCCCGCGCCGGTGGTCGCGCGCCTGCATCCGCGCAACCGCCACCAGGGCCGTTATGACATGGCCCGGCTGGTGGCGGCCAACCCGGCGCTGCGTACGCACCTGCGGCGCGCCCCGGATGGTGGGCAGAGCATCGATTTCAGCGATCCGCTGGCGGTGCGCGAACTCAACCGCGCGCTGCTGGCCAGCGATTACGGCATCGCCCACTGGGACATTCCCACCGGCTACCTGTGCCCGCCGGTGCCGGGCCGGGTGGATTACCTGCATGGCCTGGCCGACCTGCTGGCCGCCGATGCCGGTGGCGCGATCCCGCGCGGCCCCGGGGTGCGCGTGCTCGATATCGGCGTGGGCGCCAACTGCATCTACCCGCTGCTCGGGCAGGCCGAGTACGGCTGGTCGTTCGTCGCCAGCGACATCGACGGCGCCGCCCTGCAGTCGGCCGCCGCCAATGTGCGCGGCAACGGCCTCGAGGGGGTGATCGAACTGCGCCGGCAGCACGCGCGCGGCAGCCTGTTCGCCGGCGTGGTGCAGGCACAGGACCGCTTCCACCTGACTCTGTGCAACCCGCCGTTCCATGCCTCGGCCAGGGAGGCCGCGCAGGGCAGCCAGCGCAAGCTGCGCAATCTTGGCGGCGACAAGACCGCGCCGCGCGGCAAGCCGCCGCTGTTGAACTTCGGCGGCCAGGCCAACGAACTGTGGTGTACCGGTGGCGAGGCCTCGTTCCTGCGGCGGATGATCCGCGAAAGCGTGGCCGTACAGGCGCAGGTGCTGTGGTTCAGCGCGCTGGTCGCCAAGCGCGAGCACCTGGCCGACATCCATCGGCAACTGGCCCGCTCCGGCGCGCTCGACGTGCGTGAAGTGGCGATGGCGCAGGGCAGCAAGCAGAGCCGTTTCGTCGCCTGGACCTTCCACCCTGCCGCGCGCAGGACGCGGTGGCTGGCGGGGTAG
PROTEIN sequence
Length: 326
MPTPPHPATRRPAPVVARLHPRNRHQGRYDMARLVAANPALRTHLRRAPDGGQSIDFSDPLAVRELNRALLASDYGIAHWDIPTGYLCPPVPGRVDYLHGLADLLAADAGGAIPRGPGVRVLDIGVGANCIYPLLGQAEYGWSFVASDIDGAALQSAAANVRGNGLEGVIELRRQHARGSLFAGVVQAQDRFHLTLCNPPFHASAREAAQGSQRKLRNLGGDKTAPRGKPPLLNFGGQANELWCTGGEASFLRRMIRESVAVQAQVLWFSALVAKREHLADIHRQLARSGALDVREVAMAQGSKQSRFVAWTFHPAARRTRWLAG*