ggKbase home page

SCNpilot_cont_300_bf_scaffold_352_curated_20

Organism: scnpilot_dereplicated_Stenotrophomonas_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(24988..26808)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029AA07A similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 445.0
  • Bit_score: 335
  • Evalue 1.00e-88
Stenotrophomonas maltophilia strain ZBG7B contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87600.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 542.0
  • Bit_score: 360
  • Evalue 4.10e-96
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 451.0
  • Bit_score: 327
  • Evalue 8.70e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1821
ATGACCGCGTGGCTGCCGCTCGTCCTCATCGCCCTGGCCGTGCTGCTCGCCAGCCTGCGCCTGTGCCTGCCGCCACGCCCGCCGCGCGCGCGCCTGTCGCTGCTGCTGGCGCTGCAGCTGGCCGCGGCGCTGCTGCTCGGGCTGACCCTGTTCCCGCCACGCCAGCCGGTGCCCGCCGATACGCTGCTGATCGCCAGCGCCGGCACCACCGCAGCGGCGCTGGCGAGCACCCCCGCCGGCATGCGGCTGCGCCTGCCCGAAGCGCCGGCACTGGCGGACGTGGGCCGGGTACCGGATCTGGCCACCGCGCTGCGCCGGCATCCGGGTACCCGCGAACTGGTGGTCGTCGGCCAGGGCCTGCCGGCGCGCGACCGCGATGCCGCACTGCCGCCGCTGCGCTTCCTGCCCGCCCCCGCGCCGCGGGGACTGGTGGAACTGCAGGCGCCGGCGCCGCTCGCCGCCGGCGCACGCTTCGAGGTCGGCACGCGCGTACAGGGCCTGGCACGGGCGCGGGTGGAGCTGCTCGACCCGGCCGGGCATCGTGTCGCCATCGGCGTGCCCGGTGGCGACGGCCGCGTCCGCCTGGCGGCCAGCGCGCGCGACGCCGGCGACGTCGAGTTCACCCTGCGCGCGCTCGACCGCGACGGCAAGGTGCTCGACCAGTTGCCGGTGCCGGTGCGCGTGCGCCCGCTGCCGGCGCCCGCGCTGCGCCTGCTCGCCGGCGCGCCCGGGCCGGAACTGAAGTACCTGCAGCGCTGGGCCACCGATGCCGGCGCGGGCGTGCAGACCGGCATCGATGTCGGGGGCGGCGTGCAGCTGGGCGATGCACCGCCGGCGATCGACCCGGCCGGCCTCGCCCGGCTCGACCTGCTGCTGCTCGACGAGCGCCGCCTGGCCGCCTTGTCGGTGGCGCAGCGCGCGGCCATCACCGCGGCGATGCGCGACGGCCTCGGCGTGCTGGTGCGCATGGGCGGCGCGCTGGACGGCAATGCCCGCCGCACCCTGCGCGACTGGGGGCTGGACCTGCGTGGCGGCGAACGGACCACCACGGTGAAACTGCGCGACGCCGATACTGATACCGGTGCGGGTGCAGACGGTGAGCGCGCGCCCGCGGCGCCGGCCATCGAGCGCTTCGACCTGGCATTCGCCGATCCCGGCGTGGTGCCGCTGCTGCGCGCCGCCGACGACAGCGCGATCGGCGGCTGGCGCGCCTTCGGGCGGGGACGCATCGGCCTGCTGCCGATCGCCGACAGCTACACNNNNNNNNNNNNNCGCTGGCACGGCTGCCCGCCTGGGCCTGGGCCGGCGAACGCGTCGCGCTGTGCGGGCTGCCGGACGGCGCACGGGTGCAGGCGCCCGATGGCGGCACCACCGCGCTGCTGGCCGATCCACGCGCCGGCAACTGCAGCGGCTGGTGGCCGCGGCAGGCCGGTTGGCATCGCGTCGTCGCCGGCGACGCCAGCGCCGGGGTGCGGGTCATCGACCCGGCCGCCGCACGCGCCCTGCATGCCCAGGCCACGCGCGAGGCCACCGCGGCCCTGCGCGGCGGCAGCGGCCCGGCCGGTACCCGCGCGCTGCCGGTACCCGGCCCGCGCTGGCCCTGGCTGCTGGGCTTCATCGGGGTGGCCGGCCTGTTGTGGTGGCTGGAACGCCGCAGCCGCCCCGCCACGTAGCGGCACGCGCGTACGCGATGGAGCAGCCCGCAGGCGCTTCGCGCGCCCGCGGCGGCCGGCGCTACCGGCGATCACCCGTTGCCGAGGCAGGCGAGCGACCGCCGCCGGCGGCCGTCACTTCCTGGCGCTGAAGATCGGCGTCAGGTAG
PROTEIN sequence
Length: 607
MTAWLPLVLIALAVLLASLRLCLPPRPPRARLSLLLALQLAAALLLGLTLFPPRQPVPADTLLIASAGTTAAALASTPAGMRLRLPEAPALADVGRVPDLATALRRHPGTRELVVVGQGLPARDRDAALPPLRFLPAPAPRGLVELQAPAPLAAGARFEVGTRVQGLARARVELLDPAGHRVAIGVPGGDGRVRLAASARDAGDVEFTLRALDRDGKVLDQLPVPVRVRPLPAPALRLLAGAPGPELKYLQRWATDAGAGVQTGIDVGGGVQLGDAPPAIDPAGLARLDLLLLDERRLAALSVAQRAAITAAMRDGLGVLVRMGGALDGNARRTLRDWGLDLRGGERTTTVKLRDADTDTGAGADGERAPAAPAIERFDLAFADPGVVPLLRAADDSAIGGWRAFGRGRIGLLPIADSYXXXXXRWHGCPPGPGPANASRCAGCRTAHGCRRPMAAPPRCWPIHAPATAAAGGRGRPVGIASSPATPAPGCGSSTRPPHAPCMPRPRARPPRPCAAAAARPVPARCRYPARAGPGCWASSGWPACCGGWNAAAAPPRSGTRVRDGAARRRFARPRRPALPAITRCRGRRATAAGGRHFLALKIGVR*