ggKbase home page

SCNpilot_cont_300_bf_scaffold_345_curated_19

Organism: scnpilot_dereplicated_Stenotrophomonas_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(18597..19958)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=216778 species="Bacteria; Pro similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 454.0
  • Bit_score: 792
  • Evalue 2.40e-226
30S ribosomal protein S12 methylthiotransferase RimO; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 453.0
  • Bit_score: 783
  • Evalue 3.30e-224
ribosomal protein S12 methylthiotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000302A4C2 similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 454.0
  • Bit_score: 790
  • Evalue 8.60e-226

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGTCCCAGCTGAACCCAAAAGTCGGCTTCGTCAGCCTTGGCTGCCCGAAGGCCCTCGTCGATTCCGAGCGCATCCTCACCCAGTTGCGGGTGGAGGGCTACGACATCGTGCCGTCCTACGACTCGGCCGACGTCGTGGTGGTCAATACCTGCGGCTTCATCGACTCGGCCGTGGCCGAATCGCTGGACGCCATCGGCGAGGCGATGAACGAGAACGGCAAGGTCATCGTCACCGGTTGCCTGGGCAAGAAGTCGGAGATGATCCGCGAGCATTACCCGGACGTGCTGTCGGTGTCCGGGCCTCAGGACTACACCAGCGTGATGGACGCGGTGCATGCCGCGCTGCCGCCCAGGCACGACCCGTTCGTGGACCTGGTGCCGGATTACGGGATCAAGCTGACCCCGCGCCACTATGCGTACCTGAAGATTTCCGAGGGCTGCAACCACCGCTGCAGCTTCTGCATCATCCCGTCGATGCGCGGCGACCTGGTGTCGCGCCCGGTGGAGGACGTGCTGCGCGAGGCCGAGCGCCTGGTCAAGGGCGGCGTGCGCGAACTGCTGGTGGTGTCGCAGGACACCTCGGCCTACGGCGTGGACCGCAAGTACGCGCCGGGCACCTGGCGCGGCAGGGAGTACGCCACGCGCATGAAGGCGCTGTGCGAGGGGCTGTCCGAGCTGGACGCATGGACCCGCCTGCACTACGTCTACCCGTATCCGCACGTGGACGACATCGTGCCGCTGATGGCCGAGGGCAGGGTCCTGCCGTACCTGGACATCCCGTTCCAGCACGCCAGCCCGCGCATCCTCAAGCTGATGAAGCGCCCGGGCGCGGTCGACAAGACCCTGGAGCGGGTGCTGCGCTGGCGCGAAACCTGCCCGGACATCACCGTGCGCTCGACCTTCATCGTCGGCTTCCCGGGCGAGACCGAGGCCGAGTTCGAGCAGCTGCTCGAGTTCCTCGATGCCGCCCAGCTCGACCGCGTCGGCGCCTTCGCCTACTCGCCGGTGGAAGGGGCGACCGCCAACCAGCTGCCGGACCCGGTGCCTGAAGCAGTGAAGCAGGAGCGTCTGGCCCGTTTCATGGAAAAGCAGGCGGCCATTTCCGCGGCCAGGCTCGAGGCCAAGGTCGGCAGCGTGCAGCAATGCCTGGTGGACGCCATCGAGGACGGCATCGCGGTGGCGCGCTCCAAGGCCGATGCGCCGGAGATCGACGGCCTGGTGCATATCCAGAATGCCGACGCGGCGGGGCTGCGCGTGGGCGATTTCGTCGACGTGGACATCACCGACAGCGATGAGCACGACCTGTTCGGCGACGCGCGCGTCAGGCCGGCCGCCACGCCGTTCGACCTCAAGGTGCTGTGA
PROTEIN sequence
Length: 454
MSQLNPKVGFVSLGCPKALVDSERILTQLRVEGYDIVPSYDSADVVVVNTCGFIDSAVAESLDAIGEAMNENGKVIVTGCLGKKSEMIREHYPDVLSVSGPQDYTSVMDAVHAALPPRHDPFVDLVPDYGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVEDVLREAERLVKGGVRELLVVSQDTSAYGVDRKYAPGTWRGREYATRMKALCEGLSELDAWTRLHYVYPYPHVDDIVPLMAEGRVLPYLDIPFQHASPRILKLMKRPGAVDKTLERVLRWRETCPDITVRSTFIVGFPGETEAEFEQLLEFLDAAQLDRVGAFAYSPVEGATANQLPDPVPEAVKQERLARFMEKQAAISAARLEAKVGSVQQCLVDAIEDGIAVARSKADAPEIDGLVHIQNADAAGLRVGDFVDVDITDSDEHDLFGDARVRPAATPFDLKVL*