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scnpilot_expt_500_bf_sub50_scaffold_90_curated_1

Organism: scnpilot_dereplicated_Thiobacillus_1

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 4564..4785

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein (Fragment) n=1 Tax=Ixodes scapularis RepID=B7PQ76_IXOSC similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 64.0
  • Bit_score: 112
  • Evalue 2.20e-22
Uncharacterized protein {ECO:0000313|EMBL:KGD56284.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (Pseudomonas pseudomallei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 68.0
  • Bit_score: 115
  • Evalue 3.70e-23
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 64.0
  • Bit_score: 112
  • Evalue 7.00e-23

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Notes

23S rRNA (hence the unusually high coverage) Rose Kantor (5/9/16)

Taxonomy

Burkholderia pseudomallei → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGTTAGAGCGCACCGTTTCGTTCCAGCTGAAAGAGCTTTACAACCCGAAGGCCTTCTTCACTCACGCGGAATGGCTGGATCAGGGTTGCCCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCGGATCATCCTCTCAGACCCGCTACTGATCGTCGCCTTGGTAGGCCATTACCCCACCAACTAG
PROTEIN sequence
Length: 74
MLERTVSFQLKELYNPKAFFTHAEWLDQGCPHCPKFPTAASRRSLDRVSVPVWRIILSDPLLIVALVGHYPTN*