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scnpilot_p_inoc_sub60_scaffold_576_curated_3

Organism: scnpilot_dereplicated_Thiobacillus_6

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: comp(1596..2234)

Top 3 Functional Annotations

Value Algorithm Source
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 212.0
  • Bit_score: 399
  • Evalue 6.30e-109
3-isopropylmalate dehydratase small subunit id=1333551 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 213.0
  • Bit_score: 415
  • Evalue 3.50e-113
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 213.0
  • Bit_score: 415
  • Evalue 4.90e-113

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGCACGCTTTCACTGTTCTCGACGGGCTTGTGGTGCCGCTCGACCGCGCCAACGTCGACACCGACGCCATCATTCCCAAGCAGTTCCTGAAATCGATCAAGCGCGCCGGCTTCGGGCCCAACCTGTTCGACGAATGGCGTTATCTCGATCACGGCGAGCCGGGCATGGACTCCGCCACGCGCAAGCCGAACCCGGAGTTCGTGCTGAACTTCCCGCGTTATGCGGGTGCCTCGGTACTGCTGGCGCGCGACAACTTCGGCTGCGGATCGAGCCGCGAGCATGCACCGTGGGCGCTGGAAGACTACGGCATCCGCGCCATCATCGCACCGTCCTACGCCGACATCTTCTACAACAACTGCTTCAAGAACGGCATTCTGCCGATCGTGCTCGACGCTGCGGTGGTTGACCGGCTGTTCGGCGAATGCGAAGCATCCGAGGGCTACCGCCTGAACGTCGATCTCGGCAAGCAGACCGTGACCACGCCGGCTGGCGAAGTGCTGGCATTCGAAGTCGACGGCGGCCGTAAGCACCGTCTGCTGAACGGCCTGGACGATATCGGGCTGACCTTGTTGCAGGCCGACAAGATCAAGGCATACGAAGAACGACGCAAGGTCGAGGCACCTTGGTTGTTTGCATGA
PROTEIN sequence
Length: 213
MHAFTVLDGLVVPLDRANVDTDAIIPKQFLKSIKRAGFGPNLFDEWRYLDHGEPGMDSATRKPNPEFVLNFPRYAGASVLLARDNFGCGSSREHAPWALEDYGIRAIIAPSYADIFYNNCFKNGILPIVLDAAVVDRLFGECEASEGYRLNVDLGKQTVTTPAGEVLAFEVDGGRKHRLLNGLDDIGLTLLQADKIKAYEERRKVEAPWLFA*