ggKbase home page

SCNpilot_expt_300_bf_scaffold_326_curated_22

Organism: scnpilot_dereplicated_Thiobacillus_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 8979..9413

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 id=12495304 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 145.0
  • Bit_score: 276
  • Evalue 1.30e-71
50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 144.0
  • Bit_score: 252
  • Evalue 1.10e-64
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 145.0
  • Bit_score: 268
  • Evalue 5.10e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGGAACTGAACAATATCAAACCGGCAGACGGTGCTAGGCAGGACAAGCGTCGCGTGGGCCGGGGTATCGGATCGGGCCTGGGCAAGACCGCGGGCCGGGGGCATAAAGGCCAGAAGTCCCGTGCGGGCGGCTTCCATAAAGTCGGTTTCGAGGGTGGCCAGATGCCCATGCAGCGTCGTCTGCCCAAGCGCGGTTTTGTGTCGCTGACCAAGGCGGACACTGCCCGCGTGCGTCTGTACGAGTTGGCCGCCGTAGGCGTGGATGAGATTGATTTGCTGGTGCTGAAGCAGGCGGGCGTGATCAAGGCCTCTGCGAAATCCGCCAGGATTTATCTGGCCGGCGAAATTGGCAAGGCGGTCAGGTTGACGGGTATCGCCGTCACCAAGGGTGCGCGTGCTGCGATCGAGGCAGCCGGCGGTAGCGTCGCCGAATAA
PROTEIN sequence
Length: 145
MELNNIKPADGARQDKRRVGRGIGSGLGKTAGRGHKGQKSRAGGFHKVGFEGGQMPMQRRLPKRGFVSLTKADTARVRLYELAAVGVDEIDLLVLKQAGVIKASAKSARIYLAGEIGKAVRLTGIAVTKGARAAIEAAGGSVAE*