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SCNpilot_expt_300_bf_scaffold_240_curated_5

Organism: scnpilot_dereplicated_Thiobacillus_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(3098..3304)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) id=12493422 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 141
  • Evalue 2.40e-31
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 68.0
  • Bit_score: 139
  • Evalue 5.00e-31
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 69.0
  • Bit_score: 140
  • Evalue 9.90e-31

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGGAAACGGGTACTGTCAAGTGGTTTAACGATGCAAAAGGTTTTGGCTTCATCACCCCGGATAACGGCGGCGAGGATCTCTTTGCACATTTCTCCGCAATCAACGCCAGCGGCTTCAAGTCCCTGCAGGAAAACCAGAAAGTCAGCTTTGAAGTGACGACTGGCCCCAAGGGCAAGCAAGCCTCGAACATCCAGATCGTGTCGTAA
PROTEIN sequence
Length: 69
METGTVKWFNDAKGFGFITPDNGGEDLFAHFSAINASGFKSLQENQKVSFEVTTGPKGKQASNIQIVS*