ggKbase home page

SCNpilot_expt_300_bf_scaffold_186_curated_10

Organism: scnpilot_dereplicated_Thiobacillus_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(8121..9890)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat-containing protein id=12494783 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 590.0
  • Bit_score: 1140
  • Evalue 0.0
TPR repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 592.0
  • Bit_score: 808
  • Evalue 1.20e-231
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 591.0
  • Bit_score: 832
  • Evalue 2.70e-238

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1770
ATGGCATTTCTCAAGACCTTTCCCCTCTACGCCGCGCTGGCCCTCGTCGCGACCGCATGCAGCCAGCCTGCCGTCAGGGCGTCGCAGCCGGTGGCAGTGGAATCCCCGGCGCCGCAGCCTGCCGGAGCGGCCGGACCTGCCGTCGATCCGGGGGCGGAGGCTGCGGCCAAGGCCCAGGCCGCATGGCCCAAACAGCCGCTTACGCCAGATATCCTGTTCAAGTTCCTGATCGCCGAGGTGGCGGGGCAACGAGGCCAGATTGGCGTTGCCCAGTCGACCTATCTCGATCTTGCGCGGGAGACGCGTGACCCCCGTATCGCCCGCCGCGCGGCCGAAATGTCGATGTTTGCGCATAATCCGGCGGGCGCGCTGGCAGCCACGAAGCTCTGGCTGGCGGCTGAACCGGATTCGGAAACGGCCCAGCAGACCATGGCGGTGTTGCTGCTGAACGGAGGAAACCTCGCCGAAGCGGAACCCATCCTGCGTACCCTGTTGAAAAAAGAACCGGCCAATGGGTTTCTGCATTTGACCGCGGTGATGGGGAAGATCCGCGGCTCGCAGGCGGGGCTGGAAATGGTCGAACGGCTGGCGGCCGATTACCCGACCCTGCCGGAAGCGCACTTCGCGGTGGCCCAGGCCGCGGCCAGCGCCGGACGCAACGAGGCGGCGATCGCCGCGTTGCGGAAGGCCGACACCTTGCGTCCCGGCTGGGAGCCGGCGGCGCTGCTGCGAGCCCAGATCCTCGACCAGACTTCGCATGCCGACGCGCTCGCGTTCATGCGGGAGTTTCTGGCGGCGCATGCCGAGGCCCGCGAAGTCAGGCTTGCCTATGCCCGCGTTCTGGTCAGCGCCAATCGTTTCGATGAGGCGCGCGCCGAATTCGCCCGGCTGGCCCGGGACTTTCCGCGCAATGCCGAAGTAGGCTTCGCGGCGGGCCTCCTGTCCCTGCAAATGGGCGATGCCCAGGCGGCCCACGATTTCCTGGCGAAGACCCTGGAAGACAATCCGCGCGATCCCGCCGCCGTGTACTACTACCTGGGGCAGGCGGCCGAACAGATGAAACAGCCGGAAGCGGCCGGCGCGTATTACGCCGGGGTCGCGGCCGGCAATTATCTGGTGCCGGCACGTACGCGCCAGGCCGCGTTGCTGGTGGAAGCGGGCAAGCCGGATGAGGCGAGTGCGTTGCTGAAAGCGACCCGGGGCGAGAATGATGCGCAAAATGTGCGGTTGATCCAGGCTCAAGCCGAAGTGCTGCGCGGCAGCAAGCAGTACACGGCGGTCTATGCGGTCCTGTCGGATGGACTCAAGCGCTATCCCGATTCGGCCGATCTGCTGTACGACCATGCCATGGCGGCCGAAAAGCTCGGCAAGCTCGACGTGCTGGAAGCGGATTTGCGCCGCGTGATCGTGCTGCGGCCCATGGATGCGCAGGCCTACAACGCGCTGGGCTACACGCTGGCTGACCGGACCAGGCGCCTGCCCGAAGCCATCGTCCTCCTCGACAAGGCCCTGGAGTTATCGCCGGAAGACCCGTTCATTCTGGATAGCGTGGGCTGGGCGCAATACCGCTCGGGCAATCTGCCACGCGCGCAGGAATACCTTGAACGGGCCTACAAAACGCGCCCCGACCCCGAAATCGCCGCGCACCTGGGTGAAGTCCTCTGGACGCGCGGTCAGCGTGACGCGGCGAGCGAGCTTTGGCAAAGCAGCCTGCAAAACCATCCGCAGAACGAAGTGCTGCTGGAAACGTTGCACCGCTTCAAACCTTGA
PROTEIN sequence
Length: 590
MAFLKTFPLYAALALVATACSQPAVRASQPVAVESPAPQPAGAAGPAVDPGAEAAAKAQAAWPKQPLTPDILFKFLIAEVAGQRGQIGVAQSTYLDLARETRDPRIARRAAEMSMFAHNPAGALAATKLWLAAEPDSETAQQTMAVLLLNGGNLAEAEPILRTLLKKEPANGFLHLTAVMGKIRGSQAGLEMVERLAADYPTLPEAHFAVAQAAASAGRNEAAIAALRKADTLRPGWEPAALLRAQILDQTSHADALAFMREFLAAHAEAREVRLAYARVLVSANRFDEARAEFARLARDFPRNAEVGFAAGLLSLQMGDAQAAHDFLAKTLEDNPRDPAAVYYYLGQAAEQMKQPEAAGAYYAGVAAGNYLVPARTRQAALLVEAGKPDEASALLKATRGENDAQNVRLIQAQAEVLRGSKQYTAVYAVLSDGLKRYPDSADLLYDHAMAAEKLGKLDVLEADLRRVIVLRPMDAQAYNALGYTLADRTRRLPEAIVLLDKALELSPEDPFILDSVGWAQYRSGNLPRAQEYLERAYKTRPDPEIAAHLGEVLWTRGQRDAASELWQSSLQNHPQNEVLLETLHRFKP*