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SCNpilot_expt_300_bf_scaffold_245_curated_15

Organism: scnpilot_dereplicated_Thiobacillus_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(16442..16855)

Top 3 Functional Annotations

Value Algorithm Source
MerR family transcriptional regulator id=12493609 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 138.0
  • Bit_score: 258
  • Evalue 4.70e-66
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 128.0
  • Bit_score: 172
  • Evalue 1.10e-40
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABE46677.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 128.0
  • Bit_score: 172
  • Evalue 4.70e-40

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Taxonomy

Polaromonas sp. JS666 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGCGGACATTCACCATTTCCAGACTGGCGCAGCAGGCGGGCGTCAGCGTCGAGACGATCCGCTTCTACCAGCGCCGCGGCCTGCTGGCACAGCCGGAGAAACCGTCAGGCGGCATCCGCCGTTATGGTGAGGCGGACGTGGCGCGCGTGCAGTTCATCAAGGCGGCGCAGCGCATCGGGTTCACGCTGGGTGAGATTGTCCAGCTATTGCAGTGGGATGACGGCGCGCACTGCCCGGAAGCCCGCGCCATCGCCGCACGCAGGCTCGACGACGTGCGCAGGCGGCTGGCCGACCTGCAGCGCATCGAAACGGCCCTGGTCCAGCTCGTCGGACAATGCGAAGCCCGGCGCGGCACAGTACGTTGCCCGCTGATCGCCGCGCTGCGGCCGCCGCTGGCGCCCGCAGCCGGATAG
PROTEIN sequence
Length: 138
MRTFTISRLAQQAGVSVETIRFYQRRGLLAQPEKPSGGIRRYGEADVARVQFIKAAQRIGFTLGEIVQLLQWDDGAHCPEARAIAARRLDDVRRRLADLQRIETALVQLVGQCEARRGTVRCPLIAALRPPLAPAAG*