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SCNpilot_expt_300_bf_scaffold_245_curated_28

Organism: scnpilot_dereplicated_Thiobacillus_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 27297..28196

Top 3 Functional Annotations

Value Algorithm Source
uspA2; universal stress protein uspA id=12493622 bin=THIO_HI species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 300.0
  • Bit_score: 557
  • Evalue 6.20e-156
uspA2; universal stress protein uspA similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 293.0
  • Bit_score: 215
  • Evalue 3.10e-53
Universal stress protein uspA {ECO:0000313|EMBL:ABV92167.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 293.0
  • Bit_score: 215
  • Evalue 1.40e-52

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Taxonomy

Dinoroseobacter shibae → Dinoroseobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGAATCGGATCAGACATGTCCTCGCTGCCGTGGACCGGTTTCCGCAGAACGATCCCGTGCTGGCGCGCGCCGCAGAGATTGCCCGTGCACATCAGGCGCGACTCACCATTGTTCATGTCGTCGGCCGCTTCGCCGGGTTCGATCCTGCGCTTGCGGACCCGGGCATGATCCAGCATCAAATACGCCTCATCGCCCGCGAAAACATCGAGGCCGCCATGGCAAGGCAGGCAATCGACATGCCCGGAGTCGATATTCGCATTGAGTCGGGATCGCCGTCCCTGCGCCTCGTCGATCTGGCCCATGAAACCCGGGCCGATCTGGTCGTGATGATGGCGCATCAGGGAGAGTCGATCCTGGCGAAAATCATCGGCTCGACGACCGATCGGGTGATTCGCGCAGCCTGTGCGCCGGTGCTGGTGGTCAAGCGGCCGGTCATGCAAGCCTATGAACGCGTGGTGGTGGCCGTGGATCCATCCGATGAATCCGGCGCGATCGTGACCTTCGTGGCCGCGCTGTTTCCGCTGGCGCGGCTGCGTCTGGTCCATGCGGTACAGATTTCATCGCAGTTCGAGGAGGCGATGCGGCGTGCGGGCCACGGACAGGCAAGCCTGGCGGCTCATCGCGATGCCCTGGTCCGCCAGGCGAAGGCCTGCCTGCGCGACCTCTCGGAACAACTGGCGCATCGGCCGGCGCGCAGTTCGACCTGGGTGGCCGTGGGCGATCCGGCGCAGCTTCTTGCCAGGACGACGCGGAATCCGCAGGTGGGTCTGATCGTGCTGGGTCCCGGCAGCCCGGACCTGATCCGGCGGGCGCTGCTCGGCAGCGTCACCCGCCGGGTGCTGCAAACCGCGGCCTGCGATGTGTTGATCTGTCCTGCCGCCGTCATTCATCGTGTTTGA
PROTEIN sequence
Length: 300
MNRIRHVLAAVDRFPQNDPVLARAAEIARAHQARLTIVHVVGRFAGFDPALADPGMIQHQIRLIARENIEAAMARQAIDMPGVDIRIESGSPSLRLVDLAHETRADLVVMMAHQGESILAKIIGSTTDRVIRAACAPVLVVKRPVMQAYERVVVAVDPSDESGAIVTFVAALFPLARLRLVHAVQISSQFEEAMRRAGHGQASLAAHRDALVRQAKACLRDLSEQLAHRPARSSTWVAVGDPAQLLARTTRNPQVGLIVLGPGSPDLIRRALLGSVTRRVLQTAACDVLICPAAVIHRV*