ggKbase home page

SCNpilot_expt_300_bf_scaffold_130_curated_15

Organism: scnpilot_dereplicated_Thiobacillus_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(12125..15331)

Top 3 Functional Annotations

Value Algorithm Source
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=12492966 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 999.99
  • Bit_score: 2078
  • Evalue 0.0
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 999.99
  • Bit_score: 2004
  • Evalue 0.0
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 999.99
  • Bit_score: 2004
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3207
ATGCCCAGGCGCAGTGATCTAAAAAGCATTCTCATCATCGGCGCCGGCCCCATCGTCATCGGGCAGGCGTGCGAATTCGACTATTCCGGCGCGCAGGCATGCAAGGCGCTGCGCGAGGAGGGCTACAAGGTCATCCTCGTCAACAGCAATCCGGCGACGATCATGACCGACCCGGACATGGCTGACGTCACCTACATCGAGCCGATTTCCTGGCAGGTGGTCGAAAAAATCATCGAACAGGAACGCCCGGATGCGCTGCTGCCGACCATGGGCGGGCAGACCGCGCTCAACTGCGCGCTCGACCTGGCCAAACACGGGGTGCTGGAAAAATACGGCGTCGAGATGATCGGCGCGTCGAAGGAAGCGATCGACAAGGCCGAGGATCGCGAGAAGTTCAAGGCGGCGATGACGAGGCTGGGGCTGGGCTCGGCGCGTTCGTCGATCGCCCACAGCATGGAAGAGGCGCTGCAGGTGCAGGCAGCGCTCGGCTTTCCGACCATCATCCGGCCGTCGTTCACCATGGGCGGATCGGGCGGCGGCATCGCCTACAACAAGGACGAGTTCGTCGCCATCTGCGAGCGCGGCCTGGAAGCTTCGCCCACCCACGAACTGCTGATCGAGGAGTCGCTGCTCGGCTGGAAAGAGTACGAGATGGAGGTGGTGCGCGACCGCAAGGATAACTGCATCATCGTGTGTTCGATCGAGAACTTCGACCCGATGGGCGTGCATACCGGCGACTCCATTACCGTTGCGCCGGCGCAGACGCTGACCGACAAGGAATACCAGATCATGCGCAACGCCTCGCTGGCGGTGCTGCGCGAGATCGGCGTGGAAACGGGTGGCTCCAACGTGCAGTTTTCCATCAATCCGGCGGATGGTCGCATGGTGGTGATCGAGATGAACCCGCGGGTGTCGCGCTCAAGCGCGCTGGCCTCCAAGGCGACCGGCTTTCCGATCGCCAAGGTGGCGGCCAAGCTGGCGGTCGGCTATACGCTCGACGAACTGCAGAACGACATCACTGGCGGTGCGACCCCGGCCTCGTTCGAGCCGTCGATCGACTACGTGGTGACCAAGATTCCGCGCTTCGCCTTCGAGAAATTCCCGCTGGCCGACGACCGCCTGACCACGCAGATGAAGTCGGTCGGCGAGGTGATGGCAATGGGCCGCAGTTTCCAGGAGTCCCTGCAGAAAGCCCTGCGTGGACTGGAAGTCGGCGCCGACGGCCTCGATCAGAAGACCACCGACCGCGAGGAAATCGAAGCCGAATTGATGTCGCCCGGCCCCGAGCGCATCTGGTACGTCGGCGATGCGTTCCGCGTCGGCATGAGCCTCGAAGAAGTCCACGCCGTGTCGAAGATCGATCCGTGGTTCCTCGACCAGATCCAGGGCCTGATCGAACTGGAAGCCTCGCTGTCCGGACGTGCGCTGACCGACCTCGGCCGCGATGAGTTGCGCGAGCTGAAGCGCGCCGGCTTCTCCGATCGCCGTCTGGCCAGGCTGCTGAACACCGACCAGCACGCGGTGCGCGCGCGCCGCAACGAACTTTCATTGCATCCGGTCTACAAACGGGTCGACACCTGCGCGGCCGAGTTCGCCACCCAGACCGCCTACATGTACTCGACCTACGAGGAAGAGTGCGAGGCGCAGCCGACCGACGCGAAGAAGATCATGGTGCTGGGCGGCGGGCCGAACCGCATCGGCCAGGGCATCGAATTCGACTACTGCTGCGTGCACGCGGCGCTGGCGCTGCGCGAAAACGGCTTCGAGACCATCATGGTCAACTGCAACCCGGAGACCGTGTCGACCGACTACGATACCTCCGACCGCCTGTACTTCGAACCGCTGACGCTGGAAGACGTGCTCGAGATCGTGCGCATCGAGAAGCCCTTCGGTGTCATCGTGCAGTACGGCGGCCAGACGCCGCTGAAGCTGGCGCGCGACCTGGAAAGGAACGGCGTCCCCATCATCGGCACCAGCCCCGACATGATCGACGCCGCCGAAGACCGCGAGCGTTTCCAGCAGATGCTGCACGACCTCGGCCTGAAACAACCGCCCAACCGCACCGCGCGCAACCCCGAGAGCGCGCTGCGCATGGCGGCGGAGATCGGCTACCCGCTGGTGGTGCGCCCATCCTATGTTCTGGGCGGCCGCGCCATGGAAATCGTGCGCGAGGAGGCCGACCTCGTCCGCTACATGACCGAGGCGGTGAAGGTGTCGAACAAGTCGCCGGTGCTGCTCGACCGTTTCCTCAACGACGCGATTGAAGTGGATGTGGACGCGCTGTCGGACGGCGAGCAGGTGGTGATCGGCGGCATCATGCAGCACATCGAACAGGCCGGCGTGCATTCCGGCGACTCGGCGTGCTCGCTGCCGCCCTACAGCCTGTCGAACGAGATCCAGGACGAACTGCGCCGTCAGACCGTGGCGATGGCGAAAGCGCTCAAGGTCGTCGGCCTGATGAACGTGCAGTTCGCGATCCAGGGCGACACCGTCTACGTGCTCGAGGTGAACCCGCGCGCGTCGCGCACCGTGCCCTATGTGTCGAAGGCCATCGGCGCGCCGCTGGCGAAGATCGCCGCGCGTGCGATGGCCGGCATAACGCTTGCATCGCAGGCCTTCGAAAAAGAGATCATCCCGCCGTATTTCTCGGTCAAGGAAGCGGTGTTCCCGTTCCGCAAGTTTCCCGGCGTCGACACCATCCTCGGCCCCGAAATGAAATCGACCGGCGAGGTCATGGGGGTCGGCGACAACTTCGGCGAGGCCTTCGTCAAATCGCAGCTGGCATCGAGCTCCGAACTGCCCAAGCCTGGCGGGAAGGCGTTCGTCAGCGTGCGCTCGGGTGATCGTGACGCCGTGGTCGAGGTGGCACAGATGCTGCATGATCTCGGCTTCAACGTGGTCGCCACCCGTGGCACCGCGCAGACAATCGAATCCGCCGGCATTCCTGTGGCGATCGTCAACAAGGTCAAGGAAGGCCGCCCGCACATCGTCGACATGATCAAGAACGGCGACATCGATTTCATCGTCAACGTGGTCGAAGACAAGAAGGCGGTGAAGGACTCCTACGCCATTCGCGCCGAGGCGCTGGCGCGCCGGGTGGTGTATTTCACCACCCTGGCCGGTGCACGTGCCGCCTGCATGGGCATGCGGCACGGCAACGAACTGAAAGTGTATTCCCTGCAGTCGCTGCACCAGCGGTTGCACTGA
PROTEIN sequence
Length: 1069
MPRRSDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPDMADVTYIEPISWQVVEKIIEQERPDALLPTMGGQTALNCALDLAKHGVLEKYGVEMIGASKEAIDKAEDREKFKAAMTRLGLGSARSSIAHSMEEALQVQAALGFPTIIRPSFTMGGSGGGIAYNKDEFVAICERGLEASPTHELLIEESLLGWKEYEMEVVRDRKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFSINPADGRMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIPRFAFEKFPLADDRLTTQMKSVGEVMAMGRSFQESLQKALRGLEVGADGLDQKTTDREEIEAELMSPGPERIWYVGDAFRVGMSLEEVHAVSKIDPWFLDQIQGLIELEASLSGRALTDLGRDELRELKRAGFSDRRLARLLNTDQHAVRARRNELSLHPVYKRVDTCAAEFATQTAYMYSTYEEECEAQPTDAKKIMVLGGGPNRIGQGIEFDYCCVHAALALRENGFETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVRIEKPFGVIVQYGGQTPLKLARDLERNGVPIIGTSPDMIDAAEDRERFQQMLHDLGLKQPPNRTARNPESALRMAAEIGYPLVVRPSYVLGGRAMEIVREEADLVRYMTEAVKVSNKSPVLLDRFLNDAIEVDVDALSDGEQVVIGGIMQHIEQAGVHSGDSACSLPPYSLSNEIQDELRRQTVAMAKALKVVGLMNVQFAIQGDTVYVLEVNPRASRTVPYVSKAIGAPLAKIAARAMAGITLASQAFEKEIIPPYFSVKEAVFPFRKFPGVDTILGPEMKSTGEVMGVGDNFGEAFVKSQLASSSELPKPGGKAFVSVRSGDRDAVVEVAQMLHDLGFNVVATRGTAQTIESAGIPVAIVNKVKEGRPHIVDMIKNGDIDFIVNVVEDKKAVKDSYAIRAEALARRVVYFTTLAGARAACMGMRHGNELKVYSLQSLHQRLH*